Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 PRKY-204ENST00000533551 1019 ntBASIC19.22■□□□□ 0.67
CCNFP41002 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.22■□□□□ 0.67
CCNFP41002 AC069544.1-201ENST00000609399 999 ntBASIC19.22■□□□□ 0.67
CCNFP41002 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCNFP41002 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
CCNFP41002 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCNFP41002 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 AC007613.1-201ENST00000572811 2597 ntBASIC19.22■□□□□ 0.67
CCNFP41002 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNFP41002 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNFP41002 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.21■□□□□ 0.67
CCNFP41002 AL512353.2-201ENST00000448759 1962 ntBASIC19.21■□□□□ 0.67
CCNFP41002 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCNFP41002 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCNFP41002 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCNFP41002 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.21■□□□□ 0.67
CCNFP41002 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 FAM201B-201ENST00000458407 597 ntBASIC19.21■□□□□ 0.67
CCNFP41002 MIR4651-201ENST00000582622 73 ntBASIC19.21■□□□□ 0.67
CCNFP41002 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.21■□□□□ 0.67
CCNFP41002 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNFP41002 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNFP41002 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCNFP41002 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNFP41002 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.21■□□□□ 0.67
CCNFP41002 IRX1P1-201ENST00000438849 1838 ntBASIC19.21■□□□□ 0.67
CCNFP41002 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNFP41002 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNFP41002 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNFP41002 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CCNFP41002 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNFP41002 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNFP41002 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 AC006058.3-201ENST00000606217 1069 ntBASIC19.2■□□□□ 0.66
CCNFP41002 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNFP41002 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNFP41002 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCNFP41002 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNFP41002 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNFP41002 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNFP41002 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 AL390961.4-201ENST00000623958 2535 ntBASIC19.19■□□□□ 0.66
CCNFP41002 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCNFP41002 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCNFP41002 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNFP41002 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.19■□□□□ 0.66
CCNFP41002 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNFP41002 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNFP41002 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CCNFP41002 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCNFP41002 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNFP41002 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNFP41002 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNFP41002 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNFP41002 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNFP41002 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.18■□□□□ 0.66
CCNFP41002 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNFP41002 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNFP41002 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNFP41002 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNFP41002 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms