Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGCLP35914 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.05■□□□□ 0.64
HMGCLP35914 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCLP35914 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.05■□□□□ 0.64
HMGCLP35914 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
HMGCLP35914 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.05■□□□□ 0.64
HMGCLP35914 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCLP35914 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCLP35914 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLP35914 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCLP35914 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGCLP35914 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 AC097488.1-201ENST00000507834 756 ntBASIC19.04■□□□□ 0.64
HMGCLP35914 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 AL355075.4-201ENST00000554988 638 ntBASIC19.04■□□□□ 0.64
HMGCLP35914 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGCLP35914 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGCLP35914 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGCLP35914 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HMGCLP35914 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
HMGCLP35914 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGCLP35914 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLP35914 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCLP35914 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCLP35914 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCLP35914 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCLP35914 AP005242.2-201ENST00000580065 1175 ntBASIC19.03■□□□□ 0.64
HMGCLP35914 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCLP35914 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCLP35914 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCLP35914 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCLP35914 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HMGCLP35914 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCLP35914 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCLP35914 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCLP35914 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCLP35914 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGCLP35914 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HMGCLP35914 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HMGCLP35914 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGCLP35914 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.02■□□□□ 0.64
HMGCLP35914 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGCLP35914 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCLP35914 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.02■□□□□ 0.64
HMGCLP35914 SLC25A1P4-201ENST00000567977 778 ntBASIC19.02■□□□□ 0.64
HMGCLP35914 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGCLP35914 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCLP35914 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCLP35914 AC079598.2-202ENST00000546624 1451 ntBASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms