Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.84■■□□□ 1.09
COPB2P35606 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COPB2P35606 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
COPB2P35606 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COPB2P35606 TSPY23P-201ENST00000440136 739 ntBASIC21.84■■□□□ 1.09
COPB2P35606 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.84■■□□□ 1.09
COPB2P35606 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COPB2P35606 AC116407.4-201ENST00000623319 1061 ntBASIC21.84■■□□□ 1.09
COPB2P35606 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.84■■□□□ 1.09
COPB2P35606 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COPB2P35606 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
COPB2P35606 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COPB2P35606 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 AC005332.1-201ENST00000577698 1310 ntBASIC21.83■■□□□ 1.09
COPB2P35606 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.83■■□□□ 1.09
COPB2P35606 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.83■■□□□ 1.09
COPB2P35606 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.83■■□□□ 1.09
COPB2P35606 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.83■■□□□ 1.09
COPB2P35606 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COPB2P35606 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.83■■□□□ 1.09
COPB2P35606 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
COPB2P35606 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COPB2P35606 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COPB2P35606 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.82■■□□□ 1.08
COPB2P35606 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.82■■□□□ 1.08
COPB2P35606 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COPB2P35606 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.82■■□□□ 1.08
COPB2P35606 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
COPB2P35606 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COPB2P35606 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.82■■□□□ 1.08
COPB2P35606 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COPB2P35606 AC112907.2-201ENST00000448639 330 ntBASIC21.82■■□□□ 1.08
COPB2P35606 VENTXP5-201ENST00000523979 775 ntBASIC21.82■■□□□ 1.08
COPB2P35606 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.82■■□□□ 1.08
COPB2P35606 GCSHP2-201ENST00000560971 527 ntBASIC21.82■■□□□ 1.08
COPB2P35606 MIR4674-201ENST00000582457 87 ntBASIC21.82■■□□□ 1.08
COPB2P35606 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COPB2P35606 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COPB2P35606 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.82■■□□□ 1.08
COPB2P35606 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COPB2P35606 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COPB2P35606 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
COPB2P35606 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.81■■□□□ 1.08
COPB2P35606 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COPB2P35606 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 AC099778.1-201ENST00000568593 1911 ntBASIC21.81■■□□□ 1.08
COPB2P35606 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.81■■□□□ 1.08
COPB2P35606 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.81■■□□□ 1.08
COPB2P35606 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.81■■□□□ 1.08
COPB2P35606 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COPB2P35606 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 ZNF444P1-201ENST00000559497 298 ntBASIC21.81■■□□□ 1.08
COPB2P35606 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
COPB2P35606 CR769767.2-201ENST00000622735 460 ntBASIC21.81■■□□□ 1.08
COPB2P35606 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COPB2P35606 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.81■■□□□ 1.08
COPB2P35606 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COPB2P35606 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COPB2P35606 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.8■■□□□ 1.08
COPB2P35606 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.8■■□□□ 1.08
COPB2P35606 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.8■■□□□ 1.08
COPB2P35606 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.8■■□□□ 1.08
COPB2P35606 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.8■■□□□ 1.08
COPB2P35606 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.8■■□□□ 1.08
COPB2P35606 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.8■■□□□ 1.08
COPB2P35606 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.8■■□□□ 1.08
COPB2P35606 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.8■■□□□ 1.08
COPB2P35606 KRT18P56-201ENST00000507275 550 ntBASIC21.8■■□□□ 1.08
COPB2P35606 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.8■■□□□ 1.08
COPB2P35606 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COPB2P35606 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.8■■□□□ 1.08
COPB2P35606 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COPB2P35606 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.8■■□□□ 1.08
COPB2P35606 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COPB2P35606 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COPB2P35606 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms