Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.63■□□□□ 0.73
SLC6A4P31645 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A4P31645 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC6A4P31645 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A4P31645 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 TSPY17P-201ENST00000450329 467 ntBASIC19.63■□□□□ 0.73
SLC6A4P31645 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC6A4P31645 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
SLC6A4P31645 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A4P31645 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A4P31645 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC6A4P31645 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A4P31645 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A4P31645 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC6A4P31645 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC6A4P31645 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC6A4P31645 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC6A4P31645 AL137013.1-201ENST00000432946 1228 ntBASIC19.62■□□□□ 0.73
SLC6A4P31645 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.62■□□□□ 0.73
SLC6A4P31645 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A4P31645 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A4P31645 AP003041.3-201ENST00000527151 707 ntBASIC19.62■□□□□ 0.73
SLC6A4P31645 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 AC010653.2-201ENST00000623505 997 ntBASIC19.62■□□□□ 0.73
SLC6A4P31645 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A4P31645 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 AL032819.2-201ENST00000624543 2162 ntBASIC19.61■□□□□ 0.73
SLC6A4P31645 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SLC6A4P31645 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A4P31645 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 SLC25A24-204ENST00000569674 2357 ntBASIC19.61■□□□□ 0.73
SLC6A4P31645 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 TMPOP1-202ENST00000424642 1267 ntBASIC19.61■□□□□ 0.73
SLC6A4P31645 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A4P31645 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A4P31645 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A4P31645 AC092865.7-201ENST00000641832 219 ntBASIC19.61■□□□□ 0.73
SLC6A4P31645 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A4P31645 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SLC6A4P31645 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC6A4P31645 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A4P31645 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A4P31645 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A4P31645 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC6A4P31645 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLC6A4P31645 HMGA1P5-201ENST00000412453 271 ntBASIC19.6■□□□□ 0.73
SLC6A4P31645 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A4P31645 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC6A4P31645 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC6A4P31645 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC6A4P31645 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A4P31645 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A4P31645 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A4P31645 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A4P31645 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A4P31645 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A4P31645 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A4P31645 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A4P31645 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A4P31645 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A4P31645 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A4P31645 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC6A4P31645 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A4P31645 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A4P31645 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms