Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.14■□□□□ 0.5
PTPN6P29350 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PTPN6P29350 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN6P29350 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PTPN6P29350 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTPN6P29350 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN6P29350 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PTPN6P29350 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
PTPN6P29350 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.14■□□□□ 0.49
PTPN6P29350 AC142381.4-202ENST00000563973 229 ntBASIC18.14■□□□□ 0.49
PTPN6P29350 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN6P29350 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN6P29350 MTDHP1-201ENST00000605323 784 ntBASIC18.14■□□□□ 0.49
PTPN6P29350 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN6P29350 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN6P29350 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PTPN6P29350 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN6P29350 Z98044.1-201ENST00000632503 1764 ntBASIC18.14■□□□□ 0.49
PTPN6P29350 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN6P29350 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN6P29350 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN6P29350 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 WIZP1-201ENST00000531444 2299 ntBASIC18.13■□□□□ 0.49
PTPN6P29350 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN6P29350 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN6P29350 C1QBPP2-201ENST00000528754 825 ntBASIC18.13■□□□□ 0.49
PTPN6P29350 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN6P29350 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN6P29350 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN6P29350 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN6P29350 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN6P29350 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PTPN6P29350 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PTPN6P29350 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN6P29350 FEM1AP3-201ENST00000403722 1741 ntBASIC18.12■□□□□ 0.49
PTPN6P29350 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN6P29350 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN6P29350 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN6P29350 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 AL121829.2-201ENST00000620908 328 ntBASIC18.12■□□□□ 0.49
PTPN6P29350 AL359736.2-201ENST00000621992 437 ntBASIC18.12■□□□□ 0.49
PTPN6P29350 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN6P29350 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN6P29350 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PTPN6P29350 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN6P29350 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN6P29350 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN6P29350 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN6P29350 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms