Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RXRBP28702 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
RXRBP28702 GUSBP12-201ENST00000513727 720 ntBASIC25.11■■□□□ 1.61
RXRBP28702 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC25.11■■□□□ 1.61
RXRBP28702 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC25.11■■□□□ 1.61
RXRBP28702 MIR5100-201ENST00000579544 119 ntBASIC25.11■■□□□ 1.61
RXRBP28702 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.11■■□□□ 1.61
RXRBP28702 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC25.11■■□□□ 1.61
RXRBP28702 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.11■■□□□ 1.61
RXRBP28702 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.11■■□□□ 1.61
RXRBP28702 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RXRBP28702 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RXRBP28702 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RXRBP28702 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC25.11■■□□□ 1.61
RXRBP28702 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.1■■□□□ 1.61
RXRBP28702 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
RXRBP28702 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.1■■□□□ 1.61
RXRBP28702 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 CSF3-203ENST00000394148 622 ntTSL 3 BASIC25.1■■□□□ 1.61
RXRBP28702 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.1■■□□□ 1.61
RXRBP28702 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC25.1■■□□□ 1.61
RXRBP28702 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC25.1■■□□□ 1.61
RXRBP28702 LHX6-205ENST00000464484 666 ntTSL 2 BASIC25.1■■□□□ 1.61
RXRBP28702 RN7SL606P-201ENST00000472779 293 ntBASIC25.1■■□□□ 1.61
RXRBP28702 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC25.1■■□□□ 1.61
RXRBP28702 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC25.1■■□□□ 1.61
RXRBP28702 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 AC034105.1-201ENST00000563488 319 ntBASIC25.1■■□□□ 1.61
RXRBP28702 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC25.1■■□□□ 1.61
RXRBP28702 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RXRBP28702 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC25.1■■□□□ 1.61
RXRBP28702 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.09■■□□□ 1.61
RXRBP28702 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RXRBP28702 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RXRBP28702 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RXRBP28702 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RXRBP28702 AC091607.1-201ENST00000490318 1060 ntBASIC25.09■■□□□ 1.61
RXRBP28702 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RXRBP28702 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC25.09■■□□□ 1.61
RXRBP28702 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.09■■□□□ 1.61
RXRBP28702 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RXRBP28702 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.09■■□□□ 1.61
RXRBP28702 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RXRBP28702 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RXRBP28702 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.08■■□□□ 1.61
RXRBP28702 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RXRBP28702 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RXRBP28702 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RXRBP28702 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RXRBP28702 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
RXRBP28702 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25.08■■□□□ 1.61
RXRBP28702 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RXRBP28702 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RXRBP28702 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RXRBP28702 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.08■■□□□ 1.6
RXRBP28702 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
RXRBP28702 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.07■■□□□ 1.6
RXRBP28702 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
RXRBP28702 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RXRBP28702 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RXRBP28702 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
RXRBP28702 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.07■■□□□ 1.6
RXRBP28702 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
RXRBP28702 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.06■■□□□ 1.6
RXRBP28702 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RXRBP28702 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RXRBP28702 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RXRBP28702 AC211486.1-202ENST00000416371 468 ntBASIC25.06■■□□□ 1.6
RXRBP28702 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC25.06■■□□□ 1.6
RXRBP28702 AC132008.2-207ENST00000454517 770 ntBASIC25.06■■□□□ 1.6
RXRBP28702 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.06■■□□□ 1.6
RXRBP28702 AC211476.1-201ENST00000503899 468 ntBASIC25.06■■□□□ 1.6
RXRBP28702 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RXRBP28702 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.06■■□□□ 1.6
RXRBP28702 GPR32P1-201ENST00000601788 811 ntBASIC25.06■■□□□ 1.6
RXRBP28702 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RXRBP28702 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
RXRBP28702 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
RXRBP28702 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RXRBP28702 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RXRBP28702 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
RXRBP28702 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
RXRBP28702 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms