Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 AC018445.3-201ENST00000624177 1945 ntBASIC19.3■□□□□ 0.68
HLA-DPA1P20036 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 AP001412.1-201ENST00000608405 714 ntBASIC19.3■□□□□ 0.68
HLA-DPA1P20036 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.3■□□□□ 0.68
HLA-DPA1P20036 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 AL161938.1-201ENST00000569833 2180 ntBASIC19.3■□□□□ 0.68
HLA-DPA1P20036 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 FP475955.4-201ENST00000623131 1990 ntBASIC19.3■□□□□ 0.68
HLA-DPA1P20036 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 RPS2P55-201ENST00000397318 883 ntBASIC19.29■□□□□ 0.68
HLA-DPA1P20036 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.29■□□□□ 0.68
HLA-DPA1P20036 TSPY23P-201ENST00000440136 739 ntBASIC19.29■□□□□ 0.68
HLA-DPA1P20036 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 AC107956.1-201ENST00000494359 873 ntBASIC19.29■□□□□ 0.68
HLA-DPA1P20036 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 AC233702.5-201ENST00000584107 538 ntBASIC19.29■□□□□ 0.68
HLA-DPA1P20036 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 IRX1P1-201ENST00000438849 1838 ntBASIC19.29■□□□□ 0.68
HLA-DPA1P20036 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DPA1P20036 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 FEM1AP3-201ENST00000403722 1741 ntBASIC19.28■□□□□ 0.68
HLA-DPA1P20036 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HLA-DPA1P20036 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.28■□□□□ 0.68
HLA-DPA1P20036 RCC2P6-201ENST00000526625 1557 ntBASIC19.27■□□□□ 0.68
HLA-DPA1P20036 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 AC004951.3-201ENST00000418645 1148 ntBASIC19.27■□□□□ 0.68
HLA-DPA1P20036 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 CD177P1-201ENST00000606252 935 ntBASIC19.27■□□□□ 0.68
HLA-DPA1P20036 AC066615.1-201ENST00000640911 628 ntBASIC19.27■□□□□ 0.68
HLA-DPA1P20036 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DPA1P20036 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms