Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.18■□□□□ 0.66
KRT4P19013 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KRT4P19013 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT4P19013 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT4P19013 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KRT4P19013 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KRT4P19013 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT4P19013 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT4P19013 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT4P19013 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 FEM1AP3-201ENST00000403722 1741 ntBASIC19.17■□□□□ 0.66
KRT4P19013 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT4P19013 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT4P19013 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
KRT4P19013 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT4P19013 NOC2LP2-201ENST00000407594 1944 ntBASIC19.17■□□□□ 0.66
KRT4P19013 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KRT4P19013 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
KRT4P19013 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT4P19013 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT4P19013 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
KRT4P19013 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT4P19013 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 AC073210.2-201ENST00000430369 194 ntBASIC19.16■□□□□ 0.66
KRT4P19013 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KRT4P19013 ANO7L1-203ENST00000602586 1720 ntBASIC19.16■□□□□ 0.66
KRT4P19013 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 AC124283.5-201ENST00000624661 1809 ntBASIC19.16■□□□□ 0.66
KRT4P19013 KRT8P8-201ENST00000434750 1448 ntBASIC19.16■□□□□ 0.66
KRT4P19013 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT4P19013 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
KRT4P19013 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT4P19013 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT4P19013 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT4P19013 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT4P19013 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 AC068880.1-201ENST00000507289 2297 ntBASIC19.15■□□□□ 0.66
KRT4P19013 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT4P19013 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT4P19013 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
KRT4P19013 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.15■□□□□ 0.66
KRT4P19013 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.15■□□□□ 0.66
KRT4P19013 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT4P19013 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.15■□□□□ 0.66
KRT4P19013 AC005829.2-201ENST00000571422 1056 ntBASIC19.15■□□□□ 0.66
KRT4P19013 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT4P19013 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms