Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.67■□□□□ 0.42
UBL4AP11441 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBL4AP11441 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBL4AP11441 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBL4AP11441 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBL4AP11441 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UBL4AP11441 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 LINC01465-201ENST00000408887 1940 ntBASIC17.66■□□□□ 0.42
UBL4AP11441 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL4AP11441 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL4AP11441 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL4AP11441 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBL4AP11441 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBL4AP11441 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL4AP11441 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.66■□□□□ 0.42
UBL4AP11441 AL359736.2-201ENST00000621992 437 ntBASIC17.66■□□□□ 0.42
UBL4AP11441 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.66■□□□□ 0.42
UBL4AP11441 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBL4AP11441 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.66■□□□□ 0.42
UBL4AP11441 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
UBL4AP11441 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBL4AP11441 TEX21P-204ENST00000641479 1693 ntBASIC17.65■□□□□ 0.42
UBL4AP11441 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.65■□□□□ 0.42
UBL4AP11441 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 PRORSD1P-201ENST00000295112 541 ntBASIC17.65■□□□□ 0.42
UBL4AP11441 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.65■□□□□ 0.42
UBL4AP11441 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.65■□□□□ 0.42
UBL4AP11441 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.65■□□□□ 0.42
UBL4AP11441 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.65■□□□□ 0.42
UBL4AP11441 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.65■□□□□ 0.42
UBL4AP11441 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
UBL4AP11441 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBL4AP11441 HTR7P1-201ENST00000538670 1336 ntBASIC17.65■□□□□ 0.42
UBL4AP11441 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBL4AP11441 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBL4AP11441 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.64■□□□□ 0.42
UBL4AP11441 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.64■□□□□ 0.42
UBL4AP11441 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.64■□□□□ 0.41
UBL4AP11441 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
UBL4AP11441 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBL4AP11441 AC141586.3-201ENST00000562166 1838 ntBASIC17.64■□□□□ 0.41
UBL4AP11441 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 AP002982.1-201ENST00000492365 877 ntBASIC17.64■□□□□ 0.41
UBL4AP11441 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 AL160286.2-201ENST00000567150 934 ntBASIC17.64■□□□□ 0.41
UBL4AP11441 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.64■□□□□ 0.41
UBL4AP11441 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.64■□□□□ 0.41
UBL4AP11441 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
UBL4AP11441 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.64■□□□□ 0.41
UBL4AP11441 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
UBL4AP11441 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBL4AP11441 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UBL4AP11441 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBL4AP11441 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBL4AP11441 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
UBL4AP11441 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms