Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 TERF1P1-201ENST00000311003 1181 ntBASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 KRT18P57-201ENST00000443599 1254 ntBASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 AC130371.2-201ENST00000619443 611 ntBASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCNYL3P0C7X3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 KRT18P35-201ENST00000510488 1269 ntBASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.42■□□□□ 0.54
CCNYL3P0C7X3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 TSPY14P-201ENST00000303979 915 ntBASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AC004951.3-201ENST00000418645 1148 ntBASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AC011298.2-201ENST00000617989 482 ntBASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AC125437.2-201ENST00000625180 2167 ntBASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNYL3P0C7X3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms