Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CAPN1P07384 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN1P07384 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN1P07384 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN1P07384 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
CAPN1P07384 AP006587.1-201ENST00000534129 1502 ntBASIC18.79■□□□□ 0.6
CAPN1P07384 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
CAPN1P07384 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPN1P07384 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN1P07384 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPN1P07384 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN1P07384 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN1P07384 AL121906.2-201ENST00000621597 723 ntBASIC18.79■□□□□ 0.6
CAPN1P07384 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN1P07384 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN1P07384 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN1P07384 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN1P07384 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 NBPF21P-201ENST00000425093 1451 ntBASIC18.78■□□□□ 0.6
CAPN1P07384 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPN1P07384 KRT16P5-201ENST00000455284 522 ntBASIC18.78■□□□□ 0.6
CAPN1P07384 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN1P07384 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN1P07384 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN1P07384 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 KRT17P2-201ENST00000300992 1314 ntBASIC18.77■□□□□ 0.6
CAPN1P07384 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPN1P07384 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN1P07384 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN1P07384 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN1P07384 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CAPN1P07384 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN1P07384 AL161938.1-201ENST00000569833 2180 ntBASIC18.77■□□□□ 0.6
CAPN1P07384 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CAPN1P07384 TSPY15P-201ENST00000457163 923 ntBASIC18.77■□□□□ 0.6
CAPN1P07384 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPN1P07384 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CAPN1P07384 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN1P07384 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CAPN1P07384 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN1P07384 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CAPN1P07384 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CAPN1P07384 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CAPN1P07384 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CAPN1P07384 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CAPN1P07384 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.77■□□□□ 0.59
CAPN1P07384 AC141586.3-201ENST00000562166 1838 ntBASIC18.77■□□□□ 0.59
CAPN1P07384 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN1P07384 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN1P07384 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN1P07384 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN1P07384 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CAPN1P07384 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CAPN1P07384 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CAPN1P07384 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN1P07384 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN1P07384 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms