Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 AP000867.3-201ENST00000524675 377 ntBASIC25.22■■□□□ 1.63
COL5A2P05997 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.22■■□□□ 1.63
COL5A2P05997 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.22■■□□□ 1.63
COL5A2P05997 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.22■■□□□ 1.63
COL5A2P05997 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC25.22■■□□□ 1.63
COL5A2P05997 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.22■■□□□ 1.63
COL5A2P05997 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
COL5A2P05997 KRT18P31-201ENST00000506277 1292 ntBASIC25.21■■□□□ 1.63
COL5A2P05997 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.21■■□□□ 1.63
COL5A2P05997 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
COL5A2P05997 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL5A2P05997 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL5A2P05997 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL5A2P05997 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL5A2P05997 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.21■■□□□ 1.63
COL5A2P05997 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC25.21■■□□□ 1.63
COL5A2P05997 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC25.21■■□□□ 1.63
COL5A2P05997 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL5A2P05997 FOSL1P1-201ENST00000511041 816 ntBASIC25.21■■□□□ 1.63
COL5A2P05997 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC25.21■■□□□ 1.63
COL5A2P05997 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC25.21■■□□□ 1.63
COL5A2P05997 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
COL5A2P05997 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.2■■□□□ 1.63
COL5A2P05997 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL5A2P05997 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL5A2P05997 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL5A2P05997 SDHAP1-207ENST00000440850 2000 ntBASIC25.2■■□□□ 1.62
COL5A2P05997 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL5A2P05997 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
COL5A2P05997 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.2■■□□□ 1.62
COL5A2P05997 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
COL5A2P05997 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL5A2P05997 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.2■■□□□ 1.62
COL5A2P05997 AL121772.3-201ENST00000610840 674 ntBASIC25.2■■□□□ 1.62
COL5A2P05997 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL5A2P05997 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.2■■□□□ 1.62
COL5A2P05997 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC25.2■■□□□ 1.62
COL5A2P05997 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
COL5A2P05997 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL5A2P05997 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.19■■□□□ 1.62
COL5A2P05997 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
COL5A2P05997 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.19■■□□□ 1.62
COL5A2P05997 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL5A2P05997 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL5A2P05997 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
COL5A2P05997 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL5A2P05997 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL5A2P05997 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC25.19■■□□□ 1.62
COL5A2P05997 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.19■■□□□ 1.62
COL5A2P05997 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
COL5A2P05997 GAS2L1P1-201ENST00000420145 1480 ntBASIC25.19■■□□□ 1.62
COL5A2P05997 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL5A2P05997 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC25.18■■□□□ 1.62
COL5A2P05997 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.18■■□□□ 1.62
COL5A2P05997 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL5A2P05997 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
COL5A2P05997 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.18■■□□□ 1.62
COL5A2P05997 LINC00565-201ENST00000562710 2331 ntBASIC25.18■■□□□ 1.62
COL5A2P05997 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.18■■□□□ 1.62
COL5A2P05997 MRPL3P1-201ENST00000400109 1033 ntBASIC25.18■■□□□ 1.62
COL5A2P05997 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
COL5A2P05997 GRAMD4P1-201ENST00000435181 1110 ntBASIC25.18■■□□□ 1.62
COL5A2P05997 AC091304.2-201ENST00000564639 760 ntBASIC25.18■■□□□ 1.62
COL5A2P05997 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC25.18■■□□□ 1.62
COL5A2P05997 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.18■■□□□ 1.62
COL5A2P05997 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL5A2P05997 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL5A2P05997 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC25.18■■□□□ 1.62
COL5A2P05997 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.17■■□□□ 1.62
COL5A2P05997 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC25.17■■□□□ 1.62
COL5A2P05997 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC25.17■■□□□ 1.62
COL5A2P05997 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.17■■□□□ 1.62
COL5A2P05997 AC112497.1-201ENST00000624824 639 ntBASIC25.17■■□□□ 1.62
COL5A2P05997 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 UBC-206ENST00000538617 1303 ntTSL 5 BASIC25.17■■□□□ 1.62
COL5A2P05997 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.17■■□□□ 1.62
COL5A2P05997 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC25.17■■□□□ 1.62
COL5A2P05997 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC25.17■■□□□ 1.62
COL5A2P05997 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 AL162377.1-201ENST00000618844 1793 ntBASIC25.17■■□□□ 1.62
COL5A2P05997 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL5A2P05997 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
COL5A2P05997 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL5A2P05997 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
COL5A2P05997 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms