Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CD74P04233 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.07■□□□□ 0.16
CD74P04233 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.07■□□□□ 0.16
CD74P04233 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CD74P04233 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.07■□□□□ 0.16
CD74P04233 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CD74P04233 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.07■□□□□ 0.16
CD74P04233 AC068338.2-201ENST00000563278 1430 ntBASIC16.07■□□□□ 0.16
CD74P04233 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CD74P04233 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD74P04233 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CD74P04233 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CD74P04233 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD74P04233 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.06■□□□□ 0.16
CD74P04233 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD74P04233 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD74P04233 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD74P04233 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.06■□□□□ 0.16
CD74P04233 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 AL355472.2-201ENST00000422958 438 ntBASIC16.06■□□□□ 0.16
CD74P04233 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.06■□□□□ 0.16
CD74P04233 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.06■□□□□ 0.16
CD74P04233 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.06■□□□□ 0.16
CD74P04233 AL139246.5-201ENST00000606645 996 ntBASIC16.06■□□□□ 0.16
CD74P04233 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CD74P04233 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.06■□□□□ 0.16
CD74P04233 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.06■□□□□ 0.16
CD74P04233 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.06■□□□□ 0.16
CD74P04233 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD74P04233 ESPNP-201ENST00000270691 2015 ntBASIC16.06■□□□□ 0.16
CD74P04233 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CD74P04233 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.05■□□□□ 0.16
CD74P04233 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CD74P04233 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.05■□□□□ 0.16
CD74P04233 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.05■□□□□ 0.16
CD74P04233 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.05■□□□□ 0.16
CD74P04233 MIR638-201ENST00000385237 100 ntBASIC16.05■□□□□ 0.16
CD74P04233 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.05■□□□□ 0.16
CD74P04233 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD74P04233 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.04■□□□□ 0.16
CD74P04233 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CD74P04233 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 AC126763.1-201ENST00000552015 2118 ntBASIC16.04■□□□□ 0.16
CD74P04233 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.04■□□□□ 0.16
CD74P04233 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.04■□□□□ 0.16
CD74P04233 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.04■□□□□ 0.16
CD74P04233 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD74P04233 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.04■□□□□ 0.16
CD74P04233 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.04■□□□□ 0.16
CD74P04233 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD74P04233 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.04■□□□□ 0.16
CD74P04233 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CD74P04233 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD74P04233 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms