Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
TNFP01375 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.68■□□□□ 0.58
TNFP01375 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 AC092647.4-201ENST00000457211 535 ntBASIC18.68■□□□□ 0.58
TNFP01375 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TNFP01375 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFP01375 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.68■□□□□ 0.58
TNFP01375 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFP01375 AC011558.1-201ENST00000623459 338 ntBASIC18.68■□□□□ 0.58
TNFP01375 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFP01375 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFP01375 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFP01375 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TNFP01375 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFP01375 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.67■□□□□ 0.58
TNFP01375 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.67■□□□□ 0.58
TNFP01375 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TNFP01375 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.67■□□□□ 0.58
TNFP01375 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFP01375 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFP01375 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFP01375 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFP01375 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TNFP01375 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.66■□□□□ 0.58
TNFP01375 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TNFP01375 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFP01375 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TNFP01375 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TNFP01375 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFP01375 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFP01375 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNFP01375 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFP01375 TREX1-205ENST00000625293 1783 ntBASIC18.65■□□□□ 0.58
TNFP01375 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TNFP01375 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFP01375 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 AP000523.1-201ENST00000398242 1049 ntBASIC18.65■□□□□ 0.58
TNFP01375 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TNFP01375 FAM8A6P-201ENST00000407496 1135 ntBASIC18.65■□□□□ 0.58
TNFP01375 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFP01375 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
TNFP01375 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFP01375 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNFP01375 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFP01375 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNFP01375 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFP01375 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.65■□□□□ 0.58
TNFP01375 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms