Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 TSPY23P-201ENST00000440136 739 ntBASIC21.47■■□□□ 1.03
GGPS1O95749 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.47■■□□□ 1.03
GGPS1O95749 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
GGPS1O95749 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
GGPS1O95749 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.46■■□□□ 1.03
GGPS1O95749 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.46■■□□□ 1.03
GGPS1O95749 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.46■■□□□ 1.03
GGPS1O95749 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
GGPS1O95749 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.46■■□□□ 1.03
GGPS1O95749 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.46■■□□□ 1.03
GGPS1O95749 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
GGPS1O95749 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.46■■□□□ 1.03
GGPS1O95749 AL023973.1-201ENST00000624619 620 ntBASIC21.46■■□□□ 1.03
GGPS1O95749 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.46■■□□□ 1.03
GGPS1O95749 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.46■■□□□ 1.03
GGPS1O95749 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GGPS1O95749 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.46■■□□□ 1.03
GGPS1O95749 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.46■■□□□ 1.03
GGPS1O95749 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
GGPS1O95749 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
GGPS1O95749 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.45■■□□□ 1.02
GGPS1O95749 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.45■■□□□ 1.02
GGPS1O95749 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.45■■□□□ 1.02
GGPS1O95749 AC092647.4-201ENST00000457211 535 ntBASIC21.45■■□□□ 1.02
GGPS1O95749 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.45■■□□□ 1.02
GGPS1O95749 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.45■■□□□ 1.02
GGPS1O95749 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
GGPS1O95749 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 MYC-208ENST00000641036 567 ntBASIC21.45■■□□□ 1.02
GGPS1O95749 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.45■■□□□ 1.02
GGPS1O95749 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GGPS1O95749 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GGPS1O95749 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.44■■□□□ 1.02
GGPS1O95749 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.44■■□□□ 1.02
GGPS1O95749 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GGPS1O95749 PCDHAC2-203ENST00000615316 3011 ntBASIC21.44■■□□□ 1.02
GGPS1O95749 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GGPS1O95749 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.44■■□□□ 1.02
GGPS1O95749 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
GGPS1O95749 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.43■■□□□ 1.02
GGPS1O95749 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
GGPS1O95749 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.43■■□□□ 1.02
GGPS1O95749 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.43■■□□□ 1.02
GGPS1O95749 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms