Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTN3O95197 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
RTN3O95197 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTN3O95197 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RTN3O95197 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 TREX1-205ENST00000625293 1783 ntBASIC20.14■□□□□ 0.81
RTN3O95197 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN3O95197 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.14■□□□□ 0.81
RTN3O95197 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.14■□□□□ 0.81
RTN3O95197 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.14■□□□□ 0.81
RTN3O95197 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.14■□□□□ 0.81
RTN3O95197 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RTN3O95197 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.14■□□□□ 0.81
RTN3O95197 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RTN3O95197 AC116562.4-202ENST00000641738 218 ntBASIC20.14■□□□□ 0.81
RTN3O95197 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.14■□□□□ 0.81
RTN3O95197 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTN3O95197 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
RTN3O95197 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.14■□□□□ 0.81
RTN3O95197 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RTN3O95197 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN3O95197 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.13■□□□□ 0.81
RTN3O95197 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN3O95197 KRT8P11-201ENST00000409686 1436 ntBASIC20.13■□□□□ 0.81
RTN3O95197 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.13■□□□□ 0.81
RTN3O95197 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.13■□□□□ 0.81
RTN3O95197 CA15P1-201ENST00000481698 905 ntBASIC20.13■□□□□ 0.81
RTN3O95197 KRT18P21-201ENST00000515767 1272 ntBASIC20.13■□□□□ 0.81
RTN3O95197 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.13■□□□□ 0.81
RTN3O95197 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RTN3O95197 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTN3O95197 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN3O95197 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTN3O95197 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTN3O95197 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTN3O95197 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN3O95197 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN3O95197 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.12■□□□□ 0.81
RTN3O95197 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN3O95197 AC113347.1-201ENST00000413321 391 ntBASIC20.12■□□□□ 0.81
RTN3O95197 TSPY21P-201ENST00000433481 731 ntBASIC20.12■□□□□ 0.81
RTN3O95197 SLC25A3P1-201ENST00000443844 931 ntBASIC20.12■□□□□ 0.81
RTN3O95197 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN3O95197 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN3O95197 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.12■□□□□ 0.81
RTN3O95197 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN3O95197 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN3O95197 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RTN3O95197 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RTN3O95197 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RTN3O95197 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RTN3O95197 RCN1P1-201ENST00000400413 996 ntBASIC20.11■□□□□ 0.81
RTN3O95197 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RTN3O95197 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
RTN3O95197 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.11■□□□□ 0.81
RTN3O95197 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RTN3O95197 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN3O95197 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RTN3O95197 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.1■□□□□ 0.81
RTN3O95197 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RTN3O95197 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTN3O95197 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms