Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.66■□□□□ 0.42
NKX2-2O95096 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.66■□□□□ 0.42
NKX2-2O95096 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NKX2-2O95096 B3GAT3P1-201ENST00000471720 806 ntBASIC17.66■□□□□ 0.42
NKX2-2O95096 AC011506.1-201ENST00000474329 610 ntBASIC17.66■□□□□ 0.42
NKX2-2O95096 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.66■□□□□ 0.42
NKX2-2O95096 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.66■□□□□ 0.42
NKX2-2O95096 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.66■□□□□ 0.42
NKX2-2O95096 AC011298.2-201ENST00000617989 482 ntBASIC17.66■□□□□ 0.42
NKX2-2O95096 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NKX2-2O95096 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.66■□□□□ 0.42
NKX2-2O95096 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
NKX2-2O95096 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.66■□□□□ 0.42
NKX2-2O95096 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
NKX2-2O95096 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.66■□□□□ 0.42
NKX2-2O95096 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NKX2-2O95096 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 AC006333.2-201ENST00000607957 2099 ntBASIC17.65■□□□□ 0.42
NKX2-2O95096 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX2-2O95096 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.65■□□□□ 0.42
NKX2-2O95096 FSCN1P1-201ENST00000568912 1481 ntBASIC17.65■□□□□ 0.42
NKX2-2O95096 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX2-2O95096 MESTP1-201ENST00000404287 994 ntBASIC17.65■□□□□ 0.42
NKX2-2O95096 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.65■□□□□ 0.42
NKX2-2O95096 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.65■□□□□ 0.42
NKX2-2O95096 AC008040.2-201ENST00000461049 708 ntBASIC17.65■□□□□ 0.42
NKX2-2O95096 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
NKX2-2O95096 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.65■□□□□ 0.42
NKX2-2O95096 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.65■□□□□ 0.42
NKX2-2O95096 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.65■□□□□ 0.42
NKX2-2O95096 AC113410.3-201ENST00000623366 203 ntBASIC17.65■□□□□ 0.42
NKX2-2O95096 AL049637.2-201ENST00000641778 930 ntBASIC17.65■□□□□ 0.42
NKX2-2O95096 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NKX2-2O95096 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX2-2O95096 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NKX2-2O95096 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX2-2O95096 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NKX2-2O95096 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NKX2-2O95096 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NKX2-2O95096 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NKX2-2O95096 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NKX2-2O95096 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NKX2-2O95096 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX2-2O95096 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.64■□□□□ 0.41
NKX2-2O95096 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX2-2O95096 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.64■□□□□ 0.41
NKX2-2O95096 Z99916.2-201ENST00000604037 246 ntBASIC17.64■□□□□ 0.41
NKX2-2O95096 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX2-2O95096 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX2-2O95096 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NKX2-2O95096 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX2-2O95096 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NKX2-2O95096 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NKX2-2O95096 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NKX2-2O95096 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NKX2-2O95096 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.63■□□□□ 0.41
NKX2-2O95096 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.63■□□□□ 0.41
NKX2-2O95096 AC116562.2-201ENST00000507042 360 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms