Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST1O76090 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.09■□□□□ 0.81
BEST1O76090 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.09■□□□□ 0.81
BEST1O76090 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.09■□□□□ 0.81
BEST1O76090 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
BEST1O76090 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
BEST1O76090 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
BEST1O76090 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.09■□□□□ 0.81
BEST1O76090 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
BEST1O76090 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST1O76090 AC092338.2-201ENST00000568827 1415 ntBASIC20.09■□□□□ 0.81
BEST1O76090 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.09■□□□□ 0.81
BEST1O76090 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.09■□□□□ 0.81
BEST1O76090 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 KRT18P22-201ENST00000402024 1347 ntBASIC20.08■□□□□ 0.81
BEST1O76090 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.08■□□□□ 0.81
BEST1O76090 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST1O76090 SLC25A1P2-201ENST00000430693 912 ntBASIC20.08■□□□□ 0.81
BEST1O76090 AC007663.1-201ENST00000438948 1240 ntBASIC20.08■□□□□ 0.81
BEST1O76090 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.08■□□□□ 0.81
BEST1O76090 FAM87A-204ENST00000613235 858 ntBASIC20.08■□□□□ 0.81
BEST1O76090 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BEST1O76090 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.08■□□□□ 0.8
BEST1O76090 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BEST1O76090 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.07■□□□□ 0.8
BEST1O76090 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
BEST1O76090 IRX1P1-201ENST00000438849 1838 ntBASIC20.07■□□□□ 0.8
BEST1O76090 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 RCN1P1-201ENST00000400413 996 ntBASIC20.07■□□□□ 0.8
BEST1O76090 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
BEST1O76090 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.07■□□□□ 0.8
BEST1O76090 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.07■□□□□ 0.8
BEST1O76090 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
BEST1O76090 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
BEST1O76090 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST1O76090 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST1O76090 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST1O76090 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.06■□□□□ 0.8
BEST1O76090 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST1O76090 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.06■□□□□ 0.8
BEST1O76090 SLC25A3P1-201ENST00000443844 931 ntBASIC20.06■□□□□ 0.8
BEST1O76090 CA15P1-201ENST00000481698 905 ntBASIC20.06■□□□□ 0.8
BEST1O76090 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.06■□□□□ 0.8
BEST1O76090 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.06■□□□□ 0.8
BEST1O76090 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.06■□□□□ 0.8
BEST1O76090 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BEST1O76090 AL353719.1-201ENST00000566847 864 ntBASIC20.06■□□□□ 0.8
BEST1O76090 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BEST1O76090 AC116562.4-202ENST00000641738 218 ntBASIC20.06■□□□□ 0.8
BEST1O76090 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
BEST1O76090 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.06■□□□□ 0.8
BEST1O76090 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.06■□□□□ 0.8
BEST1O76090 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
BEST1O76090 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.05■□□□□ 0.8
BEST1O76090 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BEST1O76090 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.05■□□□□ 0.8
BEST1O76090 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BEST1O76090 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.05■□□□□ 0.8
BEST1O76090 KRT18P21-201ENST00000515767 1272 ntBASIC20.05■□□□□ 0.8
BEST1O76090 AC010203.1-204ENST00000548782 407 ntBASIC20.05■□□□□ 0.8
BEST1O76090 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BEST1O76090 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.05■□□□□ 0.8
BEST1O76090 AC008622.2-201ENST00000617006 1229 ntBASIC20.05■□□□□ 0.8
BEST1O76090 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
BEST1O76090 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST1O76090 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.05■□□□□ 0.8
BEST1O76090 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms