Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK1BO75841 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
UPK1BO75841 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
UPK1BO75841 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
UPK1BO75841 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UPK1BO75841 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK1BO75841 AC136469.2-201ENST00000623944 1028 ntBASIC16.68■□□□□ 0.26
UPK1BO75841 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
UPK1BO75841 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 AC008894.3-201ENST00000624324 3103 ntBASIC16.68■□□□□ 0.26
UPK1BO75841 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 AL391005.1-201ENST00000623953 2435 ntBASIC16.68■□□□□ 0.26
UPK1BO75841 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UPK1BO75841 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK1BO75841 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK1BO75841 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 NKILA-202ENST00000614771 2598 ntBASIC16.67■□□□□ 0.26
UPK1BO75841 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
UPK1BO75841 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1BO75841 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK1BO75841 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.67■□□□□ 0.26
UPK1BO75841 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK1BO75841 AL138724.1-201ENST00000606771 1088 ntBASIC16.67■□□□□ 0.26
UPK1BO75841 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
UPK1BO75841 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UPK1BO75841 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UPK1BO75841 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK1BO75841 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UPK1BO75841 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.67■□□□□ 0.26
UPK1BO75841 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK1BO75841 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1BO75841 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPK1BO75841 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1BO75841 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1BO75841 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1BO75841 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.66■□□□□ 0.26
UPK1BO75841 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 AC011676.5-201ENST00000624864 2660 ntBASIC16.66■□□□□ 0.26
UPK1BO75841 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK1BO75841 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1BO75841 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1BO75841 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1BO75841 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK1BO75841 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPK1BO75841 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1BO75841 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1BO75841 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1BO75841 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms