Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX3O60493 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
SNX3O60493 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX3O60493 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX3O60493 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX3O60493 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SNX3O60493 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX3O60493 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX3O60493 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX3O60493 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX3O60493 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX3O60493 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX3O60493 AC105020.6-201ENST00000621523 1217 ntBASIC18.84■□□□□ 0.61
SNX3O60493 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX3O60493 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SNX3O60493 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX3O60493 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX3O60493 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.83■□□□□ 0.61
SNX3O60493 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNX3O60493 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.83■□□□□ 0.61
SNX3O60493 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX3O60493 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX3O60493 PCDHA12-202ENST00000613593 2588 ntBASIC18.83■□□□□ 0.6
SNX3O60493 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX3O60493 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX3O60493 PBX2P1-201ENST00000493219 1291 ntBASIC18.83■□□□□ 0.6
SNX3O60493 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX3O60493 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SNX3O60493 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX3O60493 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
SNX3O60493 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
SNX3O60493 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNX3O60493 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SNX3O60493 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX3O60493 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX3O60493 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX3O60493 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX3O60493 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX3O60493 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX3O60493 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX3O60493 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX3O60493 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX3O60493 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SNX3O60493 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX3O60493 MCRIP2P1-201ENST00000394346 511 ntBASIC18.81■□□□□ 0.6
SNX3O60493 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX3O60493 AC016405.3-201ENST00000607710 860 ntBASIC18.81■□□□□ 0.6
SNX3O60493 AC106739.1-201ENST00000617035 715 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms