Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.03■□□□□ 0.48
URB1O60287 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.03■□□□□ 0.48
URB1O60287 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 CHCHD2P8-201ENST00000429873 447 ntBASIC18.03■□□□□ 0.48
URB1O60287 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.03■□□□□ 0.48
URB1O60287 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 HLA-A-201ENST00000376802 1334 ntBASIC18.03■□□□□ 0.48
URB1O60287 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
URB1O60287 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
URB1O60287 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.02■□□□□ 0.48
URB1O60287 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
URB1O60287 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
URB1O60287 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
URB1O60287 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.02■□□□□ 0.48
URB1O60287 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 KRT16P6-202ENST00000425692 1426 ntBASIC18.02■□□□□ 0.48
URB1O60287 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.02■□□□□ 0.48
URB1O60287 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
URB1O60287 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.02■□□□□ 0.48
URB1O60287 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.02■□□□□ 0.47
URB1O60287 MRPL3P1-201ENST00000400109 1033 ntBASIC18.02■□□□□ 0.47
URB1O60287 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
URB1O60287 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.02■□□□□ 0.47
URB1O60287 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.02■□□□□ 0.47
URB1O60287 RASA4DP-201ENST00000460726 1199 ntBASIC18.02■□□□□ 0.47
URB1O60287 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.02■□□□□ 0.47
URB1O60287 AF228730.7-201ENST00000641842 219 ntBASIC18.02■□□□□ 0.47
URB1O60287 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
URB1O60287 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
URB1O60287 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
URB1O60287 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.02■□□□□ 0.47
URB1O60287 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
URB1O60287 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 KRT18P13-201ENST00000400056 1290 ntBASIC18.01■□□□□ 0.47
URB1O60287 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.01■□□□□ 0.47
URB1O60287 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
URB1O60287 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
URB1O60287 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 TSSC2-201ENST00000450217 709 ntBASIC18.01■□□□□ 0.47
URB1O60287 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.01■□□□□ 0.47
URB1O60287 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.01■□□□□ 0.47
URB1O60287 AP002414.4-201ENST00000589764 1148 ntBASIC18.01■□□□□ 0.47
URB1O60287 AC011498.5-201ENST00000592027 486 ntBASIC18.01■□□□□ 0.47
URB1O60287 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.01■□□□□ 0.47
URB1O60287 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.01■□□□□ 0.47
URB1O60287 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.01■□□□□ 0.47
URB1O60287 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
URB1O60287 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
URB1O60287 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 KRT8P41-201ENST00000533985 1514 ntBASIC18■□□□□ 0.47
URB1O60287 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18■□□□□ 0.47
URB1O60287 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
URB1O60287 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
URB1O60287 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18■□□□□ 0.47
URB1O60287 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
URB1O60287 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms