Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN4O14493 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN4O14493 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CLDN4O14493 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN4O14493 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN4O14493 PRSS44-201ENST00000515154 1146 ntBASIC18.02■□□□□ 0.48
CLDN4O14493 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN4O14493 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN4O14493 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLDN4O14493 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CLDN4O14493 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN4O14493 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN4O14493 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN4O14493 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN4O14493 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN4O14493 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN4O14493 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLDN4O14493 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 RBM17P1-201ENST00000453646 1190 ntBASIC18.01■□□□□ 0.47
CLDN4O14493 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 AC097488.1-201ENST00000507834 756 ntBASIC18.01■□□□□ 0.47
CLDN4O14493 AL355075.4-201ENST00000554988 638 ntBASIC18.01■□□□□ 0.47
CLDN4O14493 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.01■□□□□ 0.47
CLDN4O14493 SLC25A1P4-201ENST00000567977 778 ntBASIC18.01■□□□□ 0.47
CLDN4O14493 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN4O14493 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN4O14493 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN4O14493 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN4O14493 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN4O14493 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 AL032819.2-201ENST00000624543 2162 ntBASIC18.01■□□□□ 0.47
CLDN4O14493 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN4O14493 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN4O14493 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN4O14493 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18■□□□□ 0.47
CLDN4O14493 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18■□□□□ 0.47
CLDN4O14493 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 AC007952.6-201ENST00000573168 2673 ntBASIC18■□□□□ 0.47
CLDN4O14493 AC003957.1-201ENST00000625108 2673 ntBASIC18■□□□□ 0.47
CLDN4O14493 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18■□□□□ 0.47
CLDN4O14493 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18■□□□□ 0.47
CLDN4O14493 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLDN4O14493 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18■□□□□ 0.47
CLDN4O14493 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN4O14493 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN4O14493 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLDN4O14493 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18■□□□□ 0.47
CLDN4O14493 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN4O14493 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLDN4O14493 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN4O14493 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CLDN4O14493 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN4O14493 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CLDN4O14493 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLDN4O14493 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN4O14493 AC008040.2-201ENST00000461049 708 ntBASIC17.99■□□□□ 0.47
CLDN4O14493 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN4O14493 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN4O14493 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN4O14493 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN4O14493 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms