Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHL1O00533 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.6■■□□□ 1.53
CHL1O00533 AC005332.7-201ENST00000614046 2005 ntBASIC24.6■■□□□ 1.53
CHL1O00533 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.6■■□□□ 1.53
CHL1O00533 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
CHL1O00533 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHL1O00533 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CHL1O00533 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHL1O00533 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CHL1O00533 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHL1O00533 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHL1O00533 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHL1O00533 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.59■■□□□ 1.53
CHL1O00533 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHL1O00533 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHL1O00533 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 AC006011.2-201ENST00000621313 1158 ntBASIC24.59■■□□□ 1.53
CHL1O00533 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHL1O00533 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.59■■□□□ 1.53
CHL1O00533 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHL1O00533 KRT8P45-201ENST00000414328 1447 ntBASIC24.59■■□□□ 1.53
CHL1O00533 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CHL1O00533 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHL1O00533 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CHL1O00533 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHL1O00533 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHL1O00533 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHL1O00533 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CHL1O00533 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CHL1O00533 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHL1O00533 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CHL1O00533 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHL1O00533 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.58■■□□□ 1.53
CHL1O00533 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.58■■□□□ 1.53
CHL1O00533 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.58■■□□□ 1.53
CHL1O00533 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.58■■□□□ 1.53
CHL1O00533 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
CHL1O00533 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHL1O00533 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.58■■□□□ 1.53
CHL1O00533 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHL1O00533 FP475955.4-201ENST00000623131 1990 ntBASIC24.58■■□□□ 1.52
CHL1O00533 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHL1O00533 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.57■■□□□ 1.52
CHL1O00533 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CHL1O00533 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.57■■□□□ 1.52
CHL1O00533 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHL1O00533 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHL1O00533 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHL1O00533 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.56■■□□□ 1.52
CHL1O00533 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CHL1O00533 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHL1O00533 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CHL1O00533 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHL1O00533 LIN28AP1-201ENST00000429574 405 ntBASIC24.56■■□□□ 1.52
CHL1O00533 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHL1O00533 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.56■■□□□ 1.52
CHL1O00533 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHL1O00533 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.56■■□□□ 1.52
CHL1O00533 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.56■■□□□ 1.52
CHL1O00533 GPAT2P1-201ENST00000444924 1672 ntBASIC24.56■■□□□ 1.52
CHL1O00533 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.55■■□□□ 1.52
CHL1O00533 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
CHL1O00533 BX664615.1-201ENST00000443558 458 ntBASIC24.55■■□□□ 1.52
CHL1O00533 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
CHL1O00533 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.55■■□□□ 1.52
CHL1O00533 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 AC141257.4-201ENST00000634557 245 ntBASIC24.55■■□□□ 1.52
CHL1O00533 AC136944.6-201ENST00000634818 245 ntBASIC24.55■■□□□ 1.52
CHL1O00533 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHL1O00533 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms