Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 KRT8P8-201ENST00000434750 1448 ntBASIC17.68■□□□□ 0.42
TNFRSF11BO00300 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF11BO00300 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 AL354751.1-201ENST00000412768 1863 ntBASIC17.67■□□□□ 0.42
TNFRSF11BO00300 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 FEM1AP3-201ENST00000403722 1741 ntBASIC17.67■□□□□ 0.42
TNFRSF11BO00300 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF11BO00300 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 AC124283.5-201ENST00000624661 1809 ntBASIC17.66■□□□□ 0.42
TNFRSF11BO00300 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF11BO00300 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms