Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.03■□□□□ 0.48
CLIC1O00299 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLIC1O00299 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.03■□□□□ 0.48
CLIC1O00299 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.03■□□□□ 0.48
CLIC1O00299 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.03■□□□□ 0.48
CLIC1O00299 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.03■□□□□ 0.48
CLIC1O00299 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.03■□□□□ 0.48
CLIC1O00299 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CLIC1O00299 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
CLIC1O00299 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
CLIC1O00299 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.02■□□□□ 0.48
CLIC1O00299 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLIC1O00299 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.02■□□□□ 0.48
CLIC1O00299 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLIC1O00299 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.02■□□□□ 0.48
CLIC1O00299 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.02■□□□□ 0.48
CLIC1O00299 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
CLIC1O00299 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLIC1O00299 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 AC008687.6-201ENST00000596318 630 ntBASIC18.02■□□□□ 0.48
CLIC1O00299 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLIC1O00299 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.02■□□□□ 0.48
CLIC1O00299 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CLIC1O00299 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLIC1O00299 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLIC1O00299 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.47
CLIC1O00299 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CLIC1O00299 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLIC1O00299 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CLIC1O00299 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLIC1O00299 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.01■□□□□ 0.47
CLIC1O00299 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLIC1O00299 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.01■□□□□ 0.47
CLIC1O00299 SOX15-203ENST00000570788 1093 ntBASIC18.01■□□□□ 0.47
CLIC1O00299 AC083880.1-201ENST00000608266 535 ntBASIC18.01■□□□□ 0.47
CLIC1O00299 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CLIC1O00299 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.01■□□□□ 0.47
CLIC1O00299 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.01■□□□□ 0.47
CLIC1O00299 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLIC1O00299 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLIC1O00299 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CLIC1O00299 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLIC1O00299 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLIC1O00299 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLIC1O00299 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CLIC1O00299 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLIC1O00299 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLIC1O00299 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLIC1O00299 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms