Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 KRT8P3-201ENST00000519669 1449 ntBASIC16.81■□□□□ 0.28
MBD3L3A6NE82 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 AL359075.1-203ENST00000462729 1002 ntBASIC16.81■□□□□ 0.28
MBD3L3A6NE82 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 AL121956.5-201ENST00000625261 221 ntBASIC16.81■□□□□ 0.28
MBD3L3A6NE82 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 AL358472.4-201ENST00000633140 710 ntBASIC16.8■□□□□ 0.28
MBD3L3A6NE82 GPAT2P1-201ENST00000444924 1672 ntBASIC16.8■□□□□ 0.28
MBD3L3A6NE82 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MBD3L3A6NE82 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.79■□□□□ 0.28
MBD3L3A6NE82 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 AL671277.2-201ENST00000458060 996 ntBASIC16.79■□□□□ 0.28
MBD3L3A6NE82 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 AC125437.2-201ENST00000625180 2167 ntBASIC16.79■□□□□ 0.28
MBD3L3A6NE82 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L3A6NE82 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.78■□□□□ 0.28
MBD3L3A6NE82 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L3A6NE82 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L3A6NE82 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms