Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 SDHAP1-207ENST00000440850 2000 ntBASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 TSPY21P-201ENST00000433481 731 ntBASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 AP000550.4-202ENST00000639755 178 ntBASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 PCED1CP-201ENST00000419887 785 ntBASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 TSPY23P-201ENST00000440136 739 ntBASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 NEK4P2-201ENST00000580004 1012 ntBASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 AC008622.2-201ENST00000617006 1229 ntBASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
TBC1D3BA6NDS4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D3BA6NDS4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.39■□□□□ 0.7
TBC1D3BA6NDS4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D3BA6NDS4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D3BA6NDS4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 FAM86EP-206ENST00000510506 987 ntBASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.39■□□□□ 0.69
TBC1D3BA6NDS4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms