Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.65■□□□□ 0.9
CCDC66A2RUB6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 KRT17P1-201ENST00000399211 1546 ntBASIC20.65■□□□□ 0.9
CCDC66A2RUB6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC66A2RUB6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC66A2RUB6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC66A2RUB6 AC068880.1-201ENST00000507289 2297 ntBASIC20.64■□□□□ 0.89
CCDC66A2RUB6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 AC093787.1-201ENST00000450396 207 ntBASIC20.63■□□□□ 0.89
CCDC66A2RUB6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 IKBKGP1-201ENST00000612193 1073 ntBASIC20.63■□□□□ 0.89
CCDC66A2RUB6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC66A2RUB6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 AC141586.5-201ENST00000624546 2050 ntBASIC20.62■□□□□ 0.89
CCDC66A2RUB6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms