Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 AC018470.1-201ENST00000624790 3129 ntBASIC15.61■□□□□ 0.09
DUXBA0A1W2PPF3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 AC010980.2-201ENST00000587099 1412 ntBASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.6■□□□□ 0.09
DUXBA0A1W2PPF3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 AL390719.1-204ENST00000412397 1219 ntBASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 NTF6G-201ENST00000591094 616 ntBASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 BID-214ENST00000617586 542 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 AL133373.2-201ENST00000623187 2828 ntBASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
DUXBA0A1W2PPF3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.58■□□□□ 0.09
DUXBA0A1W2PPF3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.58■□□□□ 0.09
DUXBA0A1W2PPF3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
DUXBA0A1W2PPF3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
DUXBA0A1W2PPF3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUXBA0A1W2PPF3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUXBA0A1W2PPF3 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms