Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AC093525.10-201ENST00000625130 1569 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 NCF1B-203ENST00000435988 1254 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 GUSBP6-202ENST00000438529 1198 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AL121829.2-201ENST00000620908 328 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 MYC-209ENST00000641252 345 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 AL031598.1-201ENST00000561511 1773 ntBASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00959A0A1B0GUT2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 FEM1AP3-201ENST00000403722 1741 ntBASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00959A0A1B0GUT2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
LINC00959A0A1B0GUT2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms