Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 CA15P1-201ENST00000481698 905 ntBASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 CKBP1-201ENST00000565489 1086 ntBASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 C2orf69P3-201ENST00000565542 1120 ntBASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 AC073912.3-201ENST00000624414 853 ntBASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV25A0A0B4J276 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 SDHAP1-207ENST00000440850 2000 ntBASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 CRYGFP-201ENST00000418459 633 ntBASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 MFAP1P1-201ENST00000442257 1255 ntBASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 AC008040.2-201ENST00000461049 708 ntBASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 AC079598.2-202ENST00000546624 1451 ntBASIC14.38□□□□□ -0.11
TRAV25A0A0B4J276 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 MIR1238-201ENST00000408483 83 ntBASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 AP000525.1-201ENST00000608286 694 ntBASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 PCDHAC2-203ENST00000615316 3011 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms