Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-4A0A0B4J246 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.4□□□□□ -0.27
TRAV8-4A0A0B4J246 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.4□□□□□ -0.27
TRAV8-4A0A0B4J246 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV8-4A0A0B4J246 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 SLC29A4P1-201ENST00000398760 971 ntBASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 BX276092.2-201ENST00000417668 665 ntBASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-4A0A0B4J246 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PHGDH-210ENST00000641115 1638 ntBASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-4A0A0B4J246 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms