Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 RNF152P1-201ENST00000397754 604 ntBASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 AC087388.1-201ENST00000571370 1112 ntBASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 AL031432.5-201ENST00000641059 760 ntBASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV5A0A0B4J1U4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 YBX1P2-201ENST00000489612 999 ntBASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 AC063952.2-201ENST00000498792 1227 ntBASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 AC022616.7-201ENST00000525383 220 ntBASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 AC140113.3-201ENST00000605663 199 ntBASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV5A0A0B4J1U4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 KRT8P45-201ENST00000414328 1447 ntBASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 TREX1-205ENST00000625293 1783 ntBASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.14■□□□□ 0.33
TRGV5A0A0B4J1U4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 TSPY5P-201ENST00000426936 936 ntBASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 AC092647.4-201ENST00000457211 535 ntBASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 Z82202.1-201ENST00000623446 1880 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms