Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AP003097.1-201ENST00000530657 1135 ntBASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AL138781.2-201ENST00000617896 1843 ntBASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CROCCP3-202ENST00000420820 1947 ntBASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-8A0A0A6YYG3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 FEM1AP3-201ENST00000403722 1741 ntBASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 RNA5SP413-201ENST00000516373 109 ntBASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms