Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 YBX1P10-201ENST00000444752 975 ntBASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SDHAP1-207ENST00000440850 2000 ntBASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC091874.3-201ENST00000512672 1195 ntBASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 AL121832.2-201ENST00000610979 668 ntBASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 AL121906.2-201ENST00000621597 723 ntBASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV6-7A0A0A0MS04 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC083906.2-201ENST00000511578 360 ntBASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 AL137784.2-201ENST00000607332 1000 ntBASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV6-7A0A0A0MS04 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms