Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC187A0A096LP49 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 NPAP1P7-201ENST00000613027 823 ntBASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC187A0A096LP49 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 TSPY21P-201ENST00000433481 731 ntBASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 AC092119.3-201ENST00000612618 583 ntBASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 AP005212.1-201ENST00000581547 1997 ntBASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC187A0A096LP49 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC187A0A096LP49 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 MIR3652-201ENST00000579335 131 ntBASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 AC104417.2-201ENST00000562989 1793 ntBASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC187A0A096LP49 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms