Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RCL1Q9Y2P8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCL1Q9Y2P8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCL1Q9Y2P8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCL1Q9Y2P8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.65■□□□□ 0.9
RCL1Q9Y2P8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RCL1Q9Y2P8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RCL1Q9Y2P8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCL1Q9Y2P8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCL1Q9Y2P8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCL1Q9Y2P8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCL1Q9Y2P8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCL1Q9Y2P8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.63■□□□□ 0.89
RCL1Q9Y2P8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RCL1Q9Y2P8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.63■□□□□ 0.89
RCL1Q9Y2P8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RCL1Q9Y2P8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RCL1Q9Y2P8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RCL1Q9Y2P8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCL1Q9Y2P8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCL1Q9Y2P8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RCL1Q9Y2P8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCL1Q9Y2P8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 AC127502.1-201ENST00000399971 1502 ntBASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCL1Q9Y2P8 AP002365.1-201ENST00000603448 772 ntBASIC20.59■□□□□ 0.89
RCL1Q9Y2P8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.59■□□□□ 0.89
RCL1Q9Y2P8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCL1Q9Y2P8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCL1Q9Y2P8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RCL1Q9Y2P8 AC100797.4-201ENST00000631653 1827 ntBASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCL1Q9Y2P8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCL1Q9Y2P8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RCL1Q9Y2P8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RCL1Q9Y2P8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 AC020928.2-201ENST00000588717 2197 ntBASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCL1Q9Y2P8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.53■□□□□ 0.88
RCL1Q9Y2P8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCL1Q9Y2P8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RCL1Q9Y2P8 AC145676.1-201ENST00000514988 2004 ntBASIC20.52■□□□□ 0.88
RCL1Q9Y2P8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCL1Q9Y2P8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RCL1Q9Y2P8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCL1Q9Y2P8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RCL1Q9Y2P8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCL1Q9Y2P8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCL1Q9Y2P8 AP002414.2-202ENST00000590929 1450 ntBASIC20.5■□□□□ 0.87
RCL1Q9Y2P8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCL1Q9Y2P8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RCL1Q9Y2P8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
RCL1Q9Y2P8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RCL1Q9Y2P8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RCL1Q9Y2P8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RCL1Q9Y2P8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCL1Q9Y2P8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCL1Q9Y2P8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RCL1Q9Y2P8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCL1Q9Y2P8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCL1Q9Y2P8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCL1Q9Y2P8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCL1Q9Y2P8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCL1Q9Y2P8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.47■□□□□ 0.87
RCL1Q9Y2P8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RCL1Q9Y2P8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.46■□□□□ 0.87
RCL1Q9Y2P8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RCL1Q9Y2P8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RCL1Q9Y2P8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RCL1Q9Y2P8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.46■□□□□ 0.87
RCL1Q9Y2P8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RCL1Q9Y2P8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RCL1Q9Y2P8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.45■□□□□ 0.86
RCL1Q9Y2P8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.45■□□□□ 0.86
RCL1Q9Y2P8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms