Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC006213.4-201ENST00000616184 634 ntBASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 AC010864.1-201ENST00000609407 1511 ntBASIC28.36■■■□□ 2.13
RNF216Q9NWF9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF216Q9NWF9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF216Q9NWF9 AKR1B10P2-201ENST00000577332 927 ntBASIC28.35■■■□□ 2.13
RNF216Q9NWF9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.35■■■□□ 2.13
RNF216Q9NWF9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.35■■■□□ 2.13
RNF216Q9NWF9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
RNF216Q9NWF9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF216Q9NWF9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.34■■■□□ 2.13
RNF216Q9NWF9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.34■■■□□ 2.13
RNF216Q9NWF9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RNF216Q9NWF9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RNF216Q9NWF9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.33■■■□□ 2.13
RNF216Q9NWF9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RNF216Q9NWF9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF216Q9NWF9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF216Q9NWF9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF216Q9NWF9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
RNF216Q9NWF9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.3■■■□□ 2.12
RNF216Q9NWF9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RNF216Q9NWF9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RNF216Q9NWF9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
RNF216Q9NWF9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RNF216Q9NWF9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.28■■■□□ 2.12
RNF216Q9NWF9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
RNF216Q9NWF9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
RNF216Q9NWF9 ST7-AS1-201ENST00000456775 1889 ntBASIC28.27■■■□□ 2.12
RNF216Q9NWF9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RNF216Q9NWF9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
RNF216Q9NWF9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
RNF216Q9NWF9 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC28.26■■■□□ 2.11
RNF216Q9NWF9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.26■■■□□ 2.11
RNF216Q9NWF9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.26■■■□□ 2.11
RNF216Q9NWF9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
RNF216Q9NWF9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF216Q9NWF9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF216Q9NWF9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
RNF216Q9NWF9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RNF216Q9NWF9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
RNF216Q9NWF9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF216Q9NWF9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.23■■■□□ 2.11
RNF216Q9NWF9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
RNF216Q9NWF9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF216Q9NWF9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
RNF216Q9NWF9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RNF216Q9NWF9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RNF216Q9NWF9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.21■■■□□ 2.11
RNF216Q9NWF9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.21■■■□□ 2.11
RNF216Q9NWF9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RNF216Q9NWF9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RNF216Q9NWF9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.2■■■□□ 2.1
RNF216Q9NWF9 AC008813.1-201ENST00000536597 885 ntBASIC28.2■■■□□ 2.1
RNF216Q9NWF9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RNF216Q9NWF9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RNF216Q9NWF9 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC28.19■■■□□ 2.1
RNF216Q9NWF9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
RNF216Q9NWF9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF216Q9NWF9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
RNF216Q9NWF9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RNF216Q9NWF9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF216Q9NWF9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF216Q9NWF9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RNF216Q9NWF9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.17■■■□□ 2.1
RNF216Q9NWF9 MTATP6P19-201ENST00000413797 659 ntBASIC28.17■■■□□ 2.1
RNF216Q9NWF9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.17■■■□□ 2.1
RNF216Q9NWF9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
RNF216Q9NWF9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF216Q9NWF9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
RNF216Q9NWF9 AC092473.1-201ENST00000441098 221 ntBASIC28.15■■■□□ 2.1
RNF216Q9NWF9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
RNF216Q9NWF9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
RNF216Q9NWF9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RNF216Q9NWF9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RNF216Q9NWF9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.14■■■□□ 2.1
RNF216Q9NWF9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.14■■■□□ 2.09
RNF216Q9NWF9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
RNF216Q9NWF9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
RNF216Q9NWF9 GPX1-201ENST00000419349 1106 ntBASIC28.12■■■□□ 2.09
RNF216Q9NWF9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.12■■■□□ 2.09
RNF216Q9NWF9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.12■■■□□ 2.09
RNF216Q9NWF9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNF216Q9NWF9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RNF216Q9NWF9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RNF216Q9NWF9 RARRES2P2-201ENST00000394842 485 ntBASIC28.11■■■□□ 2.09
RNF216Q9NWF9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
RNF216Q9NWF9 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC28.1■■■□□ 2.09
RNF216Q9NWF9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.1■■■□□ 2.09
RNF216Q9NWF9 RNF126P1-201ENST00000567452 1320 ntBASIC28.09■■■□□ 2.09
RNF216Q9NWF9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RNF216Q9NWF9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF216Q9NWF9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RNF216Q9NWF9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.08■■■□□ 2.09
RNF216Q9NWF9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.08■■■□□ 2.09
RNF216Q9NWF9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms