Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42SE1Q9NRR8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42SE1Q9NRR8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE1Q9NRR8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE1Q9NRR8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42SE1Q9NRR8 AC020928.2-201ENST00000588717 2197 ntBASIC13.3□□□□□ -0.28
CDC42SE1Q9NRR8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 AL139393.2-201ENST00000608721 2025 ntBASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CDC42SE1Q9NRR8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42SE1Q9NRR8 AL024507.2-201ENST00000606070 2574 ntBASIC13.27□□□□□ -0.28
CDC42SE1Q9NRR8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42SE1Q9NRR8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42SE1Q9NRR8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42SE1Q9NRR8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42SE1Q9NRR8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CDC42SE1Q9NRR8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CDC42SE1Q9NRR8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42SE1Q9NRR8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42SE1Q9NRR8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42SE1Q9NRR8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE1Q9NRR8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE1Q9NRR8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC42SE1Q9NRR8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC42SE1Q9NRR8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE1Q9NRR8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE1Q9NRR8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE1Q9NRR8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE1Q9NRR8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE1Q9NRR8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE1Q9NRR8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE1Q9NRR8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE1Q9NRR8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE1Q9NRR8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CDC42SE1Q9NRR8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE1Q9NRR8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE1Q9NRR8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE1Q9NRR8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC42SE1Q9NRR8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE1Q9NRR8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDC42SE1Q9NRR8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC13.21□□□□□ -0.3
CDC42SE1Q9NRR8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC42SE1Q9NRR8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 AC145285.7-201ENST00000614819 1539 ntBASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE1Q9NRR8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms