Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
NPAS4Q8IUM7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
NPAS4Q8IUM7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.67■■■□□ 2.02
NPAS4Q8IUM7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
NPAS4Q8IUM7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NPAS4Q8IUM7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.66■■■□□ 2.02
NPAS4Q8IUM7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
NPAS4Q8IUM7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
NPAS4Q8IUM7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.65■■■□□ 2.02
NPAS4Q8IUM7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
NPAS4Q8IUM7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NPAS4Q8IUM7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
NPAS4Q8IUM7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.65■■■□□ 2.02
NPAS4Q8IUM7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.64■■■□□ 2.02
NPAS4Q8IUM7 AC092296.2-201ENST00000589470 999 ntBASIC27.64■■■□□ 2.02
NPAS4Q8IUM7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
NPAS4Q8IUM7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
NPAS4Q8IUM7 U85056.1-201ENST00000616429 682 ntBASIC27.63■■■□□ 2.01
NPAS4Q8IUM7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NPAS4Q8IUM7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NPAS4Q8IUM7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NPAS4Q8IUM7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NPAS4Q8IUM7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NPAS4Q8IUM7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
NPAS4Q8IUM7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NPAS4Q8IUM7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.61■■■□□ 2.01
NPAS4Q8IUM7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
NPAS4Q8IUM7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.6■■■□□ 2.01
NPAS4Q8IUM7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
NPAS4Q8IUM7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NPAS4Q8IUM7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
NPAS4Q8IUM7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
NPAS4Q8IUM7 AC018358.1-201ENST00000631079 1402 ntBASIC27.58■■■□□ 2.01
NPAS4Q8IUM7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
NPAS4Q8IUM7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.58■■■□□ 2.01
NPAS4Q8IUM7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
NPAS4Q8IUM7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.57■■■□□ 2
NPAS4Q8IUM7 ECEL1P2-201ENST00000461596 1295 ntBASIC27.57■■■□□ 2
NPAS4Q8IUM7 AC126177.7-201ENST00000547904 679 ntBASIC27.57■■■□□ 2
NPAS4Q8IUM7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.57■■■□□ 2
NPAS4Q8IUM7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.56■■■□□ 2
NPAS4Q8IUM7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
NPAS4Q8IUM7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
NPAS4Q8IUM7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
NPAS4Q8IUM7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
NPAS4Q8IUM7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
NPAS4Q8IUM7 AL033527.3-201ENST00000566366 1196 ntBASIC27.55■■■□□ 2
NPAS4Q8IUM7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.55■■■□□ 2
NPAS4Q8IUM7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.55■■■□□ 2
NPAS4Q8IUM7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NPAS4Q8IUM7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
NPAS4Q8IUM7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NPAS4Q8IUM7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
NPAS4Q8IUM7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.54■■■□□ 2
NPAS4Q8IUM7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.53■■■□□ 2
NPAS4Q8IUM7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.53■■■□□ 2
NPAS4Q8IUM7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
NPAS4Q8IUM7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NPAS4Q8IUM7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.53■■■□□ 2
NPAS4Q8IUM7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.52■■■□□ 2
NPAS4Q8IUM7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NPAS4Q8IUM7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
NPAS4Q8IUM7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
NPAS4Q8IUM7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
NPAS4Q8IUM7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NPAS4Q8IUM7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
NPAS4Q8IUM7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NPAS4Q8IUM7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.49■■□□□ 1.99
NPAS4Q8IUM7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NPAS4Q8IUM7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NPAS4Q8IUM7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NPAS4Q8IUM7 KRT18P60-201ENST00000312876 1297 ntBASIC27.48■■□□□ 1.99
NPAS4Q8IUM7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
NPAS4Q8IUM7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
NPAS4Q8IUM7 AP004833.2-201ENST00000532228 1454 ntBASIC27.47■■□□□ 1.99
NPAS4Q8IUM7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NPAS4Q8IUM7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
NPAS4Q8IUM7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.46■■□□□ 1.99
NPAS4Q8IUM7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
NPAS4Q8IUM7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.45■■□□□ 1.98
NPAS4Q8IUM7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.45■■□□□ 1.98
NPAS4Q8IUM7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.45■■□□□ 1.98
NPAS4Q8IUM7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
NPAS4Q8IUM7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.45■■□□□ 1.98
NPAS4Q8IUM7 ST7-AS1-201ENST00000456775 1889 ntBASIC27.44■■□□□ 1.98
NPAS4Q8IUM7 TSPY13P-201ENST00000338964 914 ntBASIC27.44■■□□□ 1.98
NPAS4Q8IUM7 AL157400.5-201ENST00000507624 621 ntBASIC27.44■■□□□ 1.98
NPAS4Q8IUM7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
NPAS4Q8IUM7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
NPAS4Q8IUM7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.44■■□□□ 1.98
NPAS4Q8IUM7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NPAS4Q8IUM7 AC004987.1-201ENST00000428627 508 ntBASIC27.42■■□□□ 1.98
NPAS4Q8IUM7 ATP5G2P3-201ENST00000429083 425 ntBASIC27.41■■□□□ 1.98
NPAS4Q8IUM7 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms