Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.3■■□□□ 1.48
NIPAL1Q6NVV3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L13-201ENST00000554103 1267 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L15-201ENST00000611059 1267 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L23-201ENST00000615195 1269 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L24-201ENST00000617576 1269 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L22-201ENST00000618238 1269 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L20-201ENST00000619712 1269 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L21-201ENST00000622058 1269 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L10-201ENST00000622460 1267 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 DUX4L25-201ENST00000624915 1269 ntBASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.29■■□□□ 1.48
NIPAL1Q6NVV3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NIPAL1Q6NVV3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.28■■□□□ 1.48
NIPAL1Q6NVV3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.28■■□□□ 1.48
NIPAL1Q6NVV3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NIPAL1Q6NVV3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.27■■□□□ 1.48
NIPAL1Q6NVV3 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.27■■□□□ 1.48
NIPAL1Q6NVV3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NIPAL1Q6NVV3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.26■■□□□ 1.47
NIPAL1Q6NVV3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NIPAL1Q6NVV3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
NIPAL1Q6NVV3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.23■■□□□ 1.47
NIPAL1Q6NVV3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NIPAL1Q6NVV3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.23■■□□□ 1.47
NIPAL1Q6NVV3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NIPAL1Q6NVV3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NIPAL1Q6NVV3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
NIPAL1Q6NVV3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
NIPAL1Q6NVV3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NIPAL1Q6NVV3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
NIPAL1Q6NVV3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.21■■□□□ 1.47
NIPAL1Q6NVV3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
NIPAL1Q6NVV3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
NIPAL1Q6NVV3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NIPAL1Q6NVV3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
NIPAL1Q6NVV3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.2■■□□□ 1.46
NIPAL1Q6NVV3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NIPAL1Q6NVV3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NIPAL1Q6NVV3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NIPAL1Q6NVV3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NIPAL1Q6NVV3 MIR3648-2-201ENST00000581792 180 ntBASIC24.18■■□□□ 1.46
NIPAL1Q6NVV3 MIR3648-1-201ENST00000615959 180 ntBASIC24.18■■□□□ 1.46
NIPAL1Q6NVV3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
NIPAL1Q6NVV3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.17■■□□□ 1.46
NIPAL1Q6NVV3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.17■■□□□ 1.46
NIPAL1Q6NVV3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.17■■□□□ 1.46
NIPAL1Q6NVV3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.16■■□□□ 1.46
NIPAL1Q6NVV3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NIPAL1Q6NVV3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NIPAL1Q6NVV3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NIPAL1Q6NVV3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NIPAL1Q6NVV3 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.15■■□□□ 1.46
NIPAL1Q6NVV3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.15■■□□□ 1.46
NIPAL1Q6NVV3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NIPAL1Q6NVV3 CR559946.2-201ENST00000623684 991 ntBASIC24.14■■□□□ 1.45
NIPAL1Q6NVV3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.14■■□□□ 1.45
NIPAL1Q6NVV3 AC110285.7-201ENST00000624417 1536 ntBASIC24.14■■□□□ 1.45
NIPAL1Q6NVV3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NIPAL1Q6NVV3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NIPAL1Q6NVV3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NIPAL1Q6NVV3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NIPAL1Q6NVV3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.13■■□□□ 1.45
NIPAL1Q6NVV3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.13■■□□□ 1.45
NIPAL1Q6NVV3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NIPAL1Q6NVV3 AC100797.4-201ENST00000631653 1827 ntBASIC24.12■■□□□ 1.45
NIPAL1Q6NVV3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.12■■□□□ 1.45
NIPAL1Q6NVV3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NIPAL1Q6NVV3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.12■■□□□ 1.45
NIPAL1Q6NVV3 AC008813.1-201ENST00000536597 885 ntBASIC24.12■■□□□ 1.45
NIPAL1Q6NVV3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.11■■□□□ 1.45
NIPAL1Q6NVV3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
NIPAL1Q6NVV3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.11■■□□□ 1.45
NIPAL1Q6NVV3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NIPAL1Q6NVV3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NIPAL1Q6NVV3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NIPAL1Q6NVV3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.1■■□□□ 1.45
NIPAL1Q6NVV3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NIPAL1Q6NVV3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.09■■□□□ 1.45
NIPAL1Q6NVV3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NIPAL1Q6NVV3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NIPAL1Q6NVV3 AC016575.1-201ENST00000607026 382 ntBASIC24.09■■□□□ 1.45
NIPAL1Q6NVV3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NIPAL1Q6NVV3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms