Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.01■■■□□ 2.71
KCNA3P22001 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.01■■■□□ 2.71
KCNA3P22001 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32■■■□□ 2.71
KCNA3P22001 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
KCNA3P22001 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32■■■□□ 2.71
KCNA3P22001 AL592295.1-201ENST00000400984 884 ntBASIC32■■■□□ 2.71
KCNA3P22001 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32■■■□□ 2.71
KCNA3P22001 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32■■■□□ 2.71
KCNA3P22001 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
KCNA3P22001 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.99■■■□□ 2.71
KCNA3P22001 AC129492.7-201ENST00000622992 756 ntBASIC31.98■■■□□ 2.71
KCNA3P22001 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
KCNA3P22001 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.97■■■□□ 2.71
KCNA3P22001 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.97■■■□□ 2.71
KCNA3P22001 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
KCNA3P22001 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
KCNA3P22001 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
KCNA3P22001 AL451085.2-201ENST00000605085 799 ntBASIC31.96■■■□□ 2.71
KCNA3P22001 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
KCNA3P22001 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
KCNA3P22001 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
KCNA3P22001 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
KCNA3P22001 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
KCNA3P22001 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.92■■■□□ 2.7
KCNA3P22001 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
KCNA3P22001 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
KCNA3P22001 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
KCNA3P22001 DUX4L18-201ENST00000553347 1267 ntBASIC31.91■■■□□ 2.7
KCNA3P22001 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.91■■■□□ 2.7
KCNA3P22001 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.91■■■□□ 2.7
KCNA3P22001 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
KCNA3P22001 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.91■■■□□ 2.7
KCNA3P22001 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
KCNA3P22001 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
KCNA3P22001 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.89■■■□□ 2.7
KCNA3P22001 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.89■■■□□ 2.7
KCNA3P22001 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.69
KCNA3P22001 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
KCNA3P22001 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
KCNA3P22001 AL157400.5-201ENST00000507624 621 ntBASIC31.87■■■□□ 2.69
KCNA3P22001 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.87■■■□□ 2.69
KCNA3P22001 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.86■■■□□ 2.69
KCNA3P22001 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
KCNA3P22001 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
KCNA3P22001 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.86■■■□□ 2.69
KCNA3P22001 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
KCNA3P22001 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
KCNA3P22001 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.85■■■□□ 2.69
KCNA3P22001 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
KCNA3P22001 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
KCNA3P22001 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
KCNA3P22001 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.84■■■□□ 2.69
KCNA3P22001 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
KCNA3P22001 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.84■■■□□ 2.69
KCNA3P22001 AL592293.1-201ENST00000502889 1188 ntBASIC31.84■■■□□ 2.69
KCNA3P22001 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
KCNA3P22001 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
KCNA3P22001 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
KCNA3P22001 AC019069.1-201ENST00000610008 1333 ntBASIC31.83■■■□□ 2.69
KCNA3P22001 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.83■■■□□ 2.69
KCNA3P22001 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
KCNA3P22001 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
KCNA3P22001 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
KCNA3P22001 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KCNA3P22001 AC009831.1-201ENST00000580420 1582 ntBASIC31.81■■■□□ 2.68
KCNA3P22001 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
KCNA3P22001 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KCNA3P22001 AC007029.1-201ENST00000604183 313 ntBASIC31.79■■■□□ 2.68
KCNA3P22001 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
KCNA3P22001 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
KCNA3P22001 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.78■■■□□ 2.68
KCNA3P22001 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
KCNA3P22001 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNA3P22001 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNA3P22001 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
KCNA3P22001 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
KCNA3P22001 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNA3P22001 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNA3P22001 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.76■■■□□ 2.67
KCNA3P22001 AC133552.2-201ENST00000619106 1032 ntBASIC31.76■■■□□ 2.67
KCNA3P22001 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNA3P22001 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNA3P22001 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
KCNA3P22001 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KCNA3P22001 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KCNA3P22001 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KCNA3P22001 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
KCNA3P22001 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
KCNA3P22001 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.73■■■□□ 2.67
KCNA3P22001 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.73■■■□□ 2.67
KCNA3P22001 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.72■■■□□ 2.67
KCNA3P22001 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.72■■■□□ 2.67
KCNA3P22001 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNA3P22001 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.71■■■□□ 2.67
KCNA3P22001 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KCNA3P22001 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KCNA3P22001 AC126177.7-201ENST00000547904 679 ntBASIC31.71■■■□□ 2.67
KCNA3P22001 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.71■■■□□ 2.67
KCNA3P22001 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
KCNA3P22001 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms