Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 AC016575.1-201ENST00000607026 382 ntBASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM9A6NGZ8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SMIM9A6NGZ8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SMIM9A6NGZ8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.36■□□□□ 0.53
SMIM9A6NGZ8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM9A6NGZ8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.35■□□□□ 0.53
SMIM9A6NGZ8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM9A6NGZ8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.35■□□□□ 0.53
SMIM9A6NGZ8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM9A6NGZ8 MIR639-201ENST00000384974 98 ntBASIC18.34■□□□□ 0.53
SMIM9A6NGZ8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM9A6NGZ8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM9A6NGZ8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMIM9A6NGZ8 HLA-V-202ENST00000446817 847 ntBASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 AP002414.2-202ENST00000590929 1450 ntBASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.33■□□□□ 0.52
SMIM9A6NGZ8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM9A6NGZ8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM9A6NGZ8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMIM9A6NGZ8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SMIM9A6NGZ8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
SMIM9A6NGZ8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM9A6NGZ8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.3■□□□□ 0.52
SMIM9A6NGZ8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM9A6NGZ8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM9A6NGZ8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SMIM9A6NGZ8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM9A6NGZ8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM9A6NGZ8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM9A6NGZ8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM9A6NGZ8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.27■□□□□ 0.52
SMIM9A6NGZ8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM9A6NGZ8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMIM9A6NGZ8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMIM9A6NGZ8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM9A6NGZ8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM9A6NGZ8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM9A6NGZ8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.26■□□□□ 0.51
SMIM9A6NGZ8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM9A6NGZ8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM9A6NGZ8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM9A6NGZ8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM9A6NGZ8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMIM9A6NGZ8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.25■□□□□ 0.51
SMIM9A6NGZ8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM9A6NGZ8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM9A6NGZ8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM9A6NGZ8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM9A6NGZ8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM9A6NGZ8 AC148477.6-201ENST00000623746 465 ntBASIC18.23■□□□□ 0.51
SMIM9A6NGZ8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM9A6NGZ8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM9A6NGZ8 MIR4449-201ENST00000578365 66 ntBASIC18.22■□□□□ 0.51
SMIM9A6NGZ8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM9A6NGZ8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM9A6NGZ8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.21■□□□□ 0.51
SMIM9A6NGZ8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
SMIM9A6NGZ8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM9A6NGZ8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM9A6NGZ8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM9A6NGZ8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMIM9A6NGZ8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.2■□□□□ 0.5
SMIM9A6NGZ8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM9A6NGZ8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM9A6NGZ8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMIM9A6NGZ8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMIM9A6NGZ8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms