Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV25A0A0B4J276 ABCB10P3-201ENST00000561950 2166 ntBASIC19.12■□□□□ 0.65
TRAV25A0A0B4J276 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV25A0A0B4J276 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV25A0A0B4J276 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV25A0A0B4J276 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV25A0A0B4J276 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV25A0A0B4J276 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV25A0A0B4J276 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV25A0A0B4J276 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV25A0A0B4J276 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV25A0A0B4J276 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV25A0A0B4J276 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV25A0A0B4J276 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV25A0A0B4J276 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV25A0A0B4J276 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV25A0A0B4J276 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV25A0A0B4J276 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRAV25A0A0B4J276 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV25A0A0B4J276 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV25A0A0B4J276 AP002414.2-202ENST00000590929 1450 ntBASIC19.08■□□□□ 0.64
TRAV25A0A0B4J276 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV25A0A0B4J276 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV25A0A0B4J276 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV25A0A0B4J276 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV25A0A0B4J276 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV25A0A0B4J276 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV25A0A0B4J276 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV25A0A0B4J276 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV25A0A0B4J276 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV25A0A0B4J276 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV25A0A0B4J276 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV25A0A0B4J276 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV25A0A0B4J276 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV25A0A0B4J276 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV25A0A0B4J276 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV25A0A0B4J276 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV25A0A0B4J276 MIR4449-201ENST00000578365 66 ntBASIC19.02■□□□□ 0.64
TRAV25A0A0B4J276 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV25A0A0B4J276 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV25A0A0B4J276 AC148477.6-201ENST00000623746 465 ntBASIC19.01■□□□□ 0.63
TRAV25A0A0B4J276 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV25A0A0B4J276 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV25A0A0B4J276 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV25A0A0B4J276 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV25A0A0B4J276 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV25A0A0B4J276 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV25A0A0B4J276 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19■□□□□ 0.63
TRAV25A0A0B4J276 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV25A0A0B4J276 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV25A0A0B4J276 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
TRAV25A0A0B4J276 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV25A0A0B4J276 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV25A0A0B4J276 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRAV25A0A0B4J276 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV25A0A0B4J276 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV25A0A0B4J276 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV25A0A0B4J276 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV25A0A0B4J276 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV25A0A0B4J276 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV25A0A0B4J276 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV25A0A0B4J276 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV25A0A0B4J276 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV25A0A0B4J276 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV25A0A0B4J276 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV25A0A0B4J276 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
TRAV25A0A0B4J276 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV25A0A0B4J276 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV25A0A0B4J276 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 AC018358.1-201ENST00000631079 1402 ntBASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms