Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-1A0A0B4J245 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV12-1A0A0B4J245 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-1A0A0B4J245 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-1A0A0B4J245 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-1A0A0B4J245 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-1A0A0B4J245 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV12-1A0A0B4J245 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-1A0A0B4J245 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV12-1A0A0B4J245 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-1A0A0B4J245 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-1A0A0B4J245 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-1A0A0B4J245 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-1A0A0B4J245 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-1A0A0B4J245 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRAV12-1A0A0B4J245 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TRAV12-1A0A0B4J245 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV12-1A0A0B4J245 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-1A0A0B4J245 EBPL-203ENST00000378270 579 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-1A0A0B4J245 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-1A0A0B4J245 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-1A0A0B4J245 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-1A0A0B4J245 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-1A0A0B4J245 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV12-1A0A0B4J245 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-1A0A0B4J245 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-1A0A0B4J245 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV12-1A0A0B4J245 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-1A0A0B4J245 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-1A0A0B4J245 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-1A0A0B4J245 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-1A0A0B4J245 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV12-1A0A0B4J245 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV12-1A0A0B4J245 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV12-1A0A0B4J245 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAV12-1A0A0B4J245 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
TRAV12-1A0A0B4J245 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV12-1A0A0B4J245 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV12-1A0A0B4J245 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRAV12-1A0A0B4J245 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV12-1A0A0B4J245 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV12-1A0A0B4J245 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV12-1A0A0B4J245 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV12-1A0A0B4J245 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV12-1A0A0B4J245 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV12-1A0A0B4J245 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV12-1A0A0B4J245 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV12-1A0A0B4J245 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV12-1A0A0B4J245 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV12-1A0A0B4J245 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV12-1A0A0B4J245 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV12-1A0A0B4J245 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV12-1A0A0B4J245 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV12-1A0A0B4J245 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV12-1A0A0B4J245 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV12-1A0A0B4J245 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV12-1A0A0B4J245 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV12-1A0A0B4J245 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV12-1A0A0B4J245 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV12-1A0A0B4J245 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV12-1A0A0B4J245 DUSP8P4-201ENST00000399538 1761 ntBASIC17.72■□□□□ 0.43
TRAV12-1A0A0B4J245 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TRAV12-1A0A0B4J245 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV12-1A0A0B4J245 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV12-1A0A0B4J245 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV12-1A0A0B4J245 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV12-1A0A0B4J245 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV12-1A0A0B4J245 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV12-1A0A0B4J245 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV12-1A0A0B4J245 WASH5P-204ENST00000632292 975 ntBASIC17.69■□□□□ 0.42
TRAV12-1A0A0B4J245 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV12-1A0A0B4J245 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV12-1A0A0B4J245 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms