Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AP003122.3-201ENST00000526316 255 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AP000889.2-201ENST00000532684 490 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC136624.4-201ENST00000573044 370 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 BNIP3P25-201ENST00000596023 559 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC007938.3-201ENST00000604965 623 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AL592436.1-201ENST00000605135 558 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AP000654.2-201ENST00000605633 586 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC007546.1-201ENST00000619452 559 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 CPHL1P-201ENST00000461341 3407 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 A2MP1-204ENST00000566278 4130 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC027287.1-201ENST00000553115 1453 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 U3.12-201ENST00000364498 214 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL592291.1-201ENST00000403830 352 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 RNU2-29P-201ENST00000410423 189 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 RN7SKP158-201ENST00000410453 326 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC068533.1-201ENST00000418542 415 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 RPL31P12-201ENST00000422587 358 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 NUP35P1-201ENST00000422734 947 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC092017.2-201ENST00000427600 362 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL137792.2-201ENST00000443484 235 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC108059.3-201ENST00000456388 214 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 snoU13.3-201ENST00000459441 104 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 MTATP8P1-201ENST00000467115 207 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC020890.1-201ENST00000491837 504 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 CCDC34P1-201ENST00000507441 517 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AF186190.1-201ENST00000517470 480 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 RANP9-201ENST00000519957 271 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 COX6CP3-201ENST00000580869 223 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL670379.11-201ENST00000604059 253 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 CYP2C61P-201ENST00000604072 290 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL670379.10-201ENST00000604330 253 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL670379.12-201ENST00000605291 253 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL670379.9-201ENST00000605428 253 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC011373.1-201ENST00000607270 237 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AC114781.5-201ENST00000615297 108 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 AL133243.3-201ENST00000617415 3004 ntBASIC4.69□□□□□ -1.66
RNF38Q9H0F5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF38Q9H0F5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 SALL4P2-201ENST00000423288 2910 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 Y_RNA.148-201ENST00000363557 117 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 U3.15-201ENST00000365398 212 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL139095.3-201ENST00000419672 1203 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL391219.1-201ENST00000422570 483 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL160004.2-201ENST00000432935 350 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC020550.1-201ENST00000447385 163 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 HMGB3P22-202ENST00000451823 572 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 DHFRP3-201ENST00000455595 559 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 MTCO3P10-201ENST00000455912 772 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 SNRPFP3-201ENST00000457792 225 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 Y_RNA.653-201ENST00000459091 95 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC004801.2-202ENST00000463559 283 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 RPL23AP11-201ENST00000475260 469 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL135752.1-201ENST00000479477 471 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms