Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC055839.1-201ENST00000634467 498 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC106871.1-201ENST00000568324 3102 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC021146.4-201ENST00000309229 279 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-1078P-201ENST00000364522 103 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-1032P-201ENST00000384100 107 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RN7SKP159-201ENST00000410657 292 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-954P-201ENST00000411355 107 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNA5SP107-201ENST00000411358 122 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RPL30P2-201ENST00000414021 291 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC114482.1-201ENST00000418010 247 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 PDSS1P1-201ENST00000422953 1114 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RPL7P46-201ENST00000425129 740 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC105402.2-201ENST00000438503 358 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 CYCSP34-201ENST00000458172 304 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 SCARNA18-201ENST00000459004 134 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 HMGB1P30-201ENST00000492455 606 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RPL23AP55-201ENST00000498163 452 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RN7SKP46-201ENST00000515942 234 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-189P-201ENST00000516120 101 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-635P-201ENST00000516651 102 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-64P-201ENST00000517119 105 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-264P-201ENST00000517134 104 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC135001.1-201ENST00000544546 283 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AL133153.1-201ENST00000557756 303 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 CYCSP40-201ENST00000575927 294 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 ATP1B3P1-201ENST00000605365 821 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AC011890.2-201ENST00000613393 294 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 MIR8069-1-201ENST00000616627 86 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 MIR8069-2-201ENST00000621412 86 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 AL357559.1-201ENST00000622228 274 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 PNPT1P2-201ENST00000456768 2050 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 SALL4P2-201ENST00000423288 2910 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 BDP1P-201ENST00000582658 1990 ntBASIC5.26□□□□□ -1.57
SYNGAP1Q96PV0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 RNU1-94P-201ENST00000362627 173 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-82P-201ENST00000363970 107 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 SNORD3H-201ENST00000384486 214 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 U3.35-201ENST00000408405 208 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 RPL7AP25-201ENST00000423357 805 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AL353691.1-201ENST00000451332 387 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 SCARNA10-201ENST00000459255 330 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC116533.1-201ENST00000459748 321 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 RPL21P8-201ENST00000465083 535 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 RN7SL542P-201ENST00000467147 294 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC090686.1-201ENST00000481577 749 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 HMGB1P21-201ENST00000502313 581 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC023632.4-201ENST00000517783 191 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AC008013.2-202ENST00000637965 364 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 AL606537.1-201ENST00000607258 2011 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms