Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
VAMP1P23763 HIGD1AP11-201ENST00000438361 280 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AL353662.1-201ENST00000439099 327 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 NUTF2P3-201ENST00000448540 384 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 NUTF2P7-201ENST00000453086 375 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 RN7SL790P-201ENST00000474043 298 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AC027575.1-201ENST00000481064 460 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 RN7SL570P-201ENST00000484405 292 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 RN7SL267P-201ENST00000485107 261 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 RPL23AP49-201ENST00000492925 468 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AC008638.1-201ENST00000506035 866 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 NDUFB4P9-201ENST00000511646 388 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP1P23763 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.59□□□□□ -1.67
VAMP1P23763 AP000867.2-201ENST00000532468 320 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP1P23763 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.59□□□□□ -1.67
VAMP1P23763 AC040958.1-201ENST00000561102 201 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP1P23763 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VAMP1P23763 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.59□□□□□ -1.67
VAMP1P23763 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AC009229.3-201ENST00000608056 282 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AL021997.2-201ENST00000615674 271 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AL731532.2-201ENST00000623542 1953 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP1P23763 MIR3199-2-201ENST00000636243 86 ntBASIC4.59□□□□□ -1.67
VAMP1P23763 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.59□□□□□ -1.67
VAMP1P23763 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
VAMP1P23763 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
VAMP1P23763 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.59□□□□□ -1.68
VAMP1P23763 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
VAMP1P23763 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.59□□□□□ -1.68
VAMP1P23763 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
VAMP1P23763 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 MTND5P10-201ENST00000603719 1809 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP1P23763 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 RNU6-858P-201ENST00000362436 107 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 UBBP2-201ENST00000376781 231 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 RNU6-43P-201ENST00000384302 107 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 SNORD116-29-201ENST00000384516 83 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 RN7SKP263-201ENST00000411194 309 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 ATG3P1-201ENST00000419507 911 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP1P23763 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 AL354714.3-201ENST00000447284 493 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 CEACAMP4-201ENST00000457676 421 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC008571.1-201ENST00000467232 300 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC044810.1-201ENST00000480271 711 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.58□□□□□ -1.68
VAMP1P23763 AC084121.1-201ENST00000533882 835 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 CYCSP39-201ENST00000565821 309 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC093249.1-201ENST00000567049 203 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.58□□□□□ -1.68
VAMP1P23763 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.58□□□□□ -1.68
VAMP1P23763 AC009314.1-201ENST00000603871 304 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC012368.3-201ENST00000604190 219 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC011626.1-201ENST00000604710 562 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC012468.1-201ENST00000604888 430 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC018889.1-201ENST00000605372 397 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 AC018462.2-201ENST00000605375 395 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP1P23763 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VAMP1P23763 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 C4BPAP1-201ENST00000415474 1893 ntBASIC4.58□□□□□ -1.68
VAMP1P23763 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP1P23763 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP1P23763 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP1P23763 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP1P23763 AL359922.3-201ENST00000624779 1670 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP1P23763 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP1P23763 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP1P23763 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP1P23763 RPL9P7-201ENST00000330965 580 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 RNU6-1280P-201ENST00000365211 107 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 AL009179.1-201ENST00000406085 265 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 Y_RNA.594-201ENST00000410373 140 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 RNU6-325P-201ENST00000411132 105 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.57□□□□□ -1.68
VAMP1P23763 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.57□□□□□ -1.68
VAMP1P23763 CFL1P1-202ENST00000432948 411 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP1P23763 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.57□□□□□ -1.68
VAMP1P23763 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms