Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNU2-56P-201ENST00000516826 190 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AP001328.1-201ENST00000528550 176 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AL157871.3-201ENST00000557231 293 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 MIR4744-201ENST00000581563 82 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC005176.2-201ENST00000596933 147 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 SMIM12P1-201ENST00000603004 274 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC008121.1-201ENST00000603244 268 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 U7.2-201ENST00000607576 63 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AL359091.2-201ENST00000609303 556 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AL450472.3-201ENST00000615578 367 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AP000550.3-201ENST00000637734 379 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 AC116158.1-201ENST00000560231 2129 ntBASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS9D1Q9Y2B5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AC027575.3-201ENST00000583058 2747 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-460P-201ENST00000391158 108 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AC013442.1-201ENST00000397347 228 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AP000936.3-201ENST00000438127 255 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AC022431.1-201ENST00000450941 438 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RN7SL168P-201ENST00000463821 279 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-638P-201ENST00000516582 104 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-143P-201ENST00000516942 93 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 snoZ196.1-201ENST00000625269 89 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 AC068647.2-201ENST00000637380 353 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 SAGE4P-201ENST00000442271 3381 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01109-201ENST00000603837 3081 ntBASIC6□□□□□ -1.45
VPS9D1Q9Y2B5 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AC022164.1-201ENST00000568767 2673 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 Y_RNA.33-201ENST00000362591 102 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU1-134P-201ENST00000362935 165 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-428P-201ENST00000362942 107 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 SNORD115-32-201ENST00000364079 82 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-32P-201ENST00000383948 107 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-13P-201ENST00000384248 107 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-12P-201ENST00000384604 107 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-41P-201ENST00000384741 107 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 MIR301A-201ENST00000385261 86 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-381P-201ENST00000391259 108 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 BTF3L4P2-201ENST00000392798 346 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AL133388.1-201ENST00000404509 287 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 THEM7P-201ENST00000419556 672 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 NDUFB4P7-201ENST00000423198 363 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AC096638.1-201ENST00000444678 216 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 FTLP8-201ENST00000446770 267 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 ACA64.4-201ENST00000459070 127 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AL121594.1-201ENST00000475906 575 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RPL23AP75-201ENST00000491601 451 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-840P-201ENST00000517275 65 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 MIR4701-201ENST00000583094 63 ntBASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms