Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-101P-201ENST00000410323 104 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 Z99755.1-201ENST00000414048 380 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AL590632.1-201ENST00000424289 371 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC108075.1-201ENST00000424692 529 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC090774.1-201ENST00000435925 246 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 HIGD1AP11-201ENST00000438361 280 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 BTF3P6-201ENST00000448054 499 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 CEACAMP6-201ENST00000452007 574 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 HMGB3P30-201ENST00000457863 606 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC009127.1-201ENST00000467090 155 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AF213884.1-201ENST00000488102 463 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AP001086.1-201ENST00000494882 321 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-475P-201ENST00000516073 104 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC087854.1-201ENST00000519706 414 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC026371.1-201ENST00000551867 419 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 MIR4700-201ENST00000578311 74 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC005899.2-201ENST00000584353 90 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC104695.3-201ENST00000604052 296 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC104763.2-201ENST00000604179 382 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AL450472.3-201ENST00000615578 367 ntBASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM56Q9BRZ2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 SNORD62.1-201ENST00000362541 86 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNU1-43P-201ENST00000365052 165 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-715P-201ENST00000365204 103 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-701P-201ENST00000384059 107 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-214P-201ENST00000384130 107 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 MIR600-201ENST00000385007 98 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AL645927.1-201ENST00000396783 406 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AL445189.1-201ENST00000405722 338 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNU4-78P-201ENST00000410940 126 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC007738.1-201ENST00000413892 348 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC080125.1-201ENST00000414888 684 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RPL23AP27-201ENST00000415161 451 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 PPP1R11P2-201ENST00000423543 382 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RPL7P37-201ENST00000425095 738 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 CKS1BP5-201ENST00000434172 273 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AL356981.1-201ENST00000454879 684 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 SNORD5.1-201ENST00000458800 75 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC091180.1-201ENST00000462104 372 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 DEFB109F-201ENST00000491870 277 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC022493.2-201ENST00000506122 481 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC096745.1-201ENST00000509945 370 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-677P-201ENST00000516914 101 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC090151.1-201ENST00000520784 730 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AC012669.1-201ENST00000603209 283 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 AL158032.1-201ENST00000605401 106 ntBASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms